| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr3 | 112301606 | 112305477 | AR | LNCaP-abl | 112303280 | 112303604 |
| chr3 | 112301606 | 112305477 | AR | myofibroblast | 112303935 | 112304226 |
| chr3 | 112301606 | 112305477 | ARID1A | HAP1 | 112303249 | 112303636 |
| chr3 | 112301606 | 112305477 | ARNT | SK-MEL-28 | 112302929 | 112303487 |
| chr3 | 112301606 | 112305477 | ASH2L | GM12878 | 112303438 | 112304054 |
| chr3 | 112301606 | 112305477 | ATF2 | WA01 | 112303132 | 112303785 |
| chr3 | 112306505 | 112307196 | BATF | OCI-Ly10 | 112306986 | 112307147 |
| chr3 | 112301606 | 112305477 | BCL11A | CD34 | 112303429 | 112303535 |
| chr3 | 112301606 | 112305477 | BCL6 | OCI-Ly1 | 112302529 | 112302796 |
| chr3 | 112301606 | 112305477 | BCL6 | OCI-Ly1 | 112303790 | 112304028 |
| chr3 | 112306505 | 112307196 | BCL6 | CD4 | 112306909 | 112307032 |
| chr3 | 112301606 | 112305477 | BCOR | WA01 | 112303124 | 112303546 |
| chr3 | 112301606 | 112305477 | BCOR | B-cell | 112304279 | 112304439 |
| chr3 | 112307301 | 112309629 | BRCA1 | MCF-10A | 112308257 | 112308583 |
| chr3 | 112301606 | 112305477 | BRD1 | HUES-64 | 112302472 | 112302811 |
| chr3 | 112301606 | 112305477 | CHD1 | WA01 | 112303666 | 112303826 |
| chr3 | 112301606 | 112305477 | CHD2 | WA01 | 112303100 | 112303240 |
| chr3 | 112307301 | 112309629 | CHD2 | SK-N-SH | 112308229 | 112308365 |
| chr3 | 112301606 | 112305477 | CHD4 | 501-mel | 112302985 | 112303154 |
| chr3 | 112301606 | 112305477 | CHD4 | 501-mel | 112304464 | 112304680 |
| chr3 | 112301606 | 112305477 | CHD7 | hiPSC,WA01 | 112303148 | 112303547 |
| chr3 | 112307301 | 112309629 | CHD7 | hiPSC | 112308230 | 112308647 |
| chr3 | 112301606 | 112305477 | CREB1 | GM23338 | 112303918 | 112304082 |
| chr3 | 112307301 | 112309629 | CREB1 | LNCaP-abl | 112309150 | 112309458 |
| chr3 | 112301606 | 112305477 | CTCF | HAP1 | 112303111 | 112303543 |
| chr3 | 112301606 | 112305477 | CTCF | gastroesophageal-sphincter | 112303814 | 112304030 |
| chr3 | 112301606 | 112305477 | CTCF | A-549,Kelly,GM04648,NB69,hepatocyte,DOHH2,keratinocyte,astrocyte,lymphoblast,primary-epidermal-keratinocyte,SK-N-SH,ID00016,ascending-aorta,PC-3,MCF-7,IMR-90,stomach,plasmablast,HCT-116,myoblast,GM12868,BE2C,skin,OCI-Ly7,breast,smooth-muscle-cell,HFF,gastroesophageal-sphincter,spleen,MM1-S,GM04604,heart,GM12869,BJ,GM12867,COLO-829,erythroblast,T-cell,cardiac,colon,hiPSC,leukemia,testis,GM12873,uterus,hESC,thoracic-aorta,osteoblast,fibroblast,primary-glioblastoma,GM12872,A-673,HL-60,K-562,GM12865,THP-1,SK-MEL-147,Loucy,GM12875,FT282,LNCaP,GM12871,bonchial,esophagus,GM09237,GM12870,epithelial,GM12864,HeLa-S3,WI-38,myotube,choroid-plexus,SLK,endothelial,lung,B-cell,aorta,WA01,delta-47,HAP1,HeLa-Kyoto,adrenal-gland,HeLa,MDA-MB-157,thyroid-gland,OCI-Ly1,neural,cortical-interneuron,esophagus-muscularis-mucosa,tibial-artery,GM12866,HEC-1-B,tibial-nerve,GM12878,GM09236,GM06077,NCI-H929,SU-DHL-6 | 112304660 | 112304947 |
| chr3 | 112306505 | 112307196 | CTCF | anterior-temporal-cortex | 112306939 | 112307091 |
| chr3 | 112301606 | 112305477 | EGR1 | WA01 | 112303198 | 112303448 |
| chr3 | 112301606 | 112305477 | EOMES | hESC | 112303246 | 112303443 |
| chr3 | 112301606 | 112305477 | EP300 | WA01 | 112302480 | 112302746 |
| chr3 | 112301606 | 112305477 | EP300 | WA01,hESC | 112303184 | 112303449 |
| chr3 | 112307301 | 112309629 | EP300 | SK-N-SH | 112308192 | 112308326 |
| chr3 | 112307301 | 112309629 | ESR1 | MCF-7,ZR751,breast | 112307612 | 112307849 |
| chr3 | 112307301 | 112309629 | ESR1 | breast | 112308286 | 112308571 |
| chr3 | 112307301 | 112309629 | ESRRG | cardiomyocyte | 112308098 | 112308516 |
| chr3 | 112301606 | 112305477 | ETS1 | hESC | 112303150 | 112303289 |
| chr3 | 112301606 | 112305477 | ETS1 | cardiomyocyte | 112303255 | 112303475 |
| chr3 | 112301606 | 112305477 | EZH2 | SU-DHL-5 | 112302495 | 112302559 |
| chr3 | 112301606 | 112305477 | EZH2 | LNCaP | 112302578 | 112302804 |
| chr3 | 112307301 | 112309629 | EZH2 | OCI-Ly7 | 112309226 | 112309476 |
| chr3 | 112301606 | 112305477 | FLI1 | ME-1 | 112303722 | 112303976 |
| chr3 | 112301606 | 112305477 | FOSL1 | WA01 | 112303891 | 112304063 |
| chr3 | 112307301 | 112309629 | FOXA1 | T-47D,ZR751,pancreatic-progenitor,ZR-75-1,LNCaP-abl,LAPC-4,MCF-7-TAMR-1,LNCaP,MCF-7,primary-breast-cancer,breast,NCI-H3122,22Rv1,breast-cancer,prostate | 112307645 | 112307900 |
| chr3 | 112307301 | 112309629 | FOXA2 | liver,pancreatic-progenitor,Caco-2,KerCT | 112307617 | 112307922 |
| chr3 | 112301606 | 112305477 | FOXM1 | MDA-MB-231 | 112303232 | 112303464 |
| chr3 | 112301606 | 112305477 | GATA1 | HUDEP-2,erythroblast,CD34 | 112302054 | 112302332 |
| chr3 | 112301606 | 112305477 | GATA1 | CD34 | 112303371 | 112303553 |
| chr3 | 112301606 | 112305477 | GATA1 | CD34 | 112304758 | 112304813 |
| chr3 | 112307301 | 112309629 | GATA1 | CD34 | 112308269 | 112308336 |
| chr3 | 112301606 | 112305477 | GATA2 | K-562 | 112302186 | 112302302 |
| chr3 | 112307301 | 112309629 | GATA2 | SKH1 | 112307637 | 112307831 |
| chr3 | 112307301 | 112309629 | GATA2 | SH-SY5Y | 112308146 | 112308419 |
| chr3 | 112301606 | 112305477 | GATA3 | Jurkat | 112302062 | 112302240 |
| chr3 | 112301606 | 112305477 | GATA4 | pancreatic-progenitor | 112302068 | 112302372 |
| chr3 | 112301606 | 112305477 | GATA4 | pancreatic-progenitor | 112303227 | 112303944 |
| chr3 | 112301606 | 112305477 | GATA4 | cardiomyocyte | 112303917 | 112304057 |
| chr3 | 112307301 | 112309629 | GATA4 | pancreatic-progenitor | 112307503 | 112307954 |
| chr3 | 112307301 | 112309629 | GATA4 | pancreatic-progenitor | 112308168 | 112308432 |
| chr3 | 112301606 | 112305477 | GATA6 | HUES-8,pancreatic-progenitor | 112303122 | 112303684 |
| chr3 | 112307301 | 112309629 | GATA6 | pancreatic-progenitor | 112307709 | 112307937 |
| chr3 | 112301606 | 112305477 | GLIS3 | H9 | 112303070 | 112303554 |
| chr3 | 112301606 | 112305477 | GTF3C2 | H9 | 112302557 | 112302782 |
| chr3 | 112307301 | 112309629 | HAND2 | SK-N-BE2-C | 112308198 | 112308393 |
| chr3 | 112301606 | 112305477 | HDAC2 | pre-B-cell | 112303037 | 112303321 |
| chr3 | 112301606 | 112305477 | HDAC2 | WA01 | 112303232 | 112303425 |
| chr3 | 112306505 | 112307196 | HDAC2 | WA01 | 112307044 | 112307183 |
| chr3 | 112301606 | 112305477 | HDAC3 | AML | 112303368 | 112303481 |
| chr3 | 112307301 | 112309629 | HNF4A | Caco-2 | 112307755 | 112307859 |
| chr3 | 112307301 | 112309629 | HOXB13 | prostate | 112307684 | 112307836 |
| chr3 | 112301606 | 112305477 | IRF2 | keratinocyte | 112302701 | 112302859 |
| chr3 | 112301606 | 112305477 | IRF4 | NCI-H929 | 112303028 | 112303300 |
| chr3 | 112301606 | 112305477 | IRF4 | NCI-H929 | 112303568 | 112303661 |
| chr3 | 112306505 | 112307196 | IRF4 | NCI-H929 | 112306948 | 112307052 |
| chr3 | 112307301 | 112309629 | JUNB | MCF10A-Er-Src | 112308650 | 112308774 |
| chr3 | 112301606 | 112305477 | JUND | Kasumi-1 | 112302504 | 112302625 |
| chr3 | 112301606 | 112305477 | JUND | WA01 | 112302593 | 112302695 |
| chr3 | 112301606 | 112305477 | JUND | WA01 | 112303102 | 112303222 |
| chr3 | 112301606 | 112305477 | JUND | WA01 | 112303179 | 112303374 |
| chr3 | 112301606 | 112305477 | JUN | HUES-8 | 112303254 | 112303648 |
| chr3 | 112307301 | 112309629 | JUN | MCF10A-Er-Src | 112308639 | 112308830 |
| chr3 | 112301606 | 112305477 | KLF4 | HAP1 | 112303204 | 112303527 |
| chr3 | 112301606 | 112305477 | LDB1 | HEP | 112302109 | 112302297 |
| chr3 | 112301606 | 112305477 | LMO1 | Jurkat | 112302062 | 112302362 |
| chr3 | 112301606 | 112305477 | LMO2 | CCRF-CEM | 112302555 | 112302713 |
| chr3 | 112306505 | 112307196 | LMO2 | Kasumi-1 | 112306982 | 112307128 |
| chr3 | 112307301 | 112309629 | MAFB | islet | 112307680 | 112307912 |
| chr3 | 112301606 | 112305477 | MAX | melanocyte | 112302997 | 112303194 |
| chr3 | 112301606 | 112305477 | MAX | WA01 | 112303166 | 112303486 |
| chr3 | 112301606 | 112305477 | MAX | P493-6 | 112304133 | 112304344 |
| chr3 | 112307301 | 112309629 | MAX | NCI-H2171 | 112308170 | 112308359 |
| chr3 | 112301606 | 112305477 | MLLT1 | GM12878 | 112303659 | 112303909 |
| chr3 | 112301606 | 112305477 | MTA2 | pre-B-cell | 112302497 | 112302697 |
| chr3 | 112307301 | 112309629 | MXI1 | SK-N-SH | 112308197 | 112308425 |
| chr3 | 112301606 | 112305477 | MYB | Jurkat,MOLT-3 | 112302096 | 112302286 |
| chr3 | 112301606 | 112305477 | MYB | CD4 | 112303646 | 112303831 |
| chr3 | 112301606 | 112305477 | MYBL2 | A-673 | 112303035 | 112304024 |
| chr3 | 112301606 | 112305477 | MYCN | LA-N-5 | 112304018 | 112304443 |
| chr3 | 112301606 | 112305477 | NANOG | HUES-8,WA09,hESC,WA01 | 112303170 | 112303571 |
| chr3 | 112307301 | 112309629 | NFKB1 | MCF10A-Er-Src | 112308279 | 112308429 |
| chr3 | 112307301 | 112309629 | NFKB1 | MCF10A-Er-Src | 112308563 | 112308829 |
| chr3 | 112301606 | 112305477 | NKX2-5 | hESC | 112303804 | 112304043 |
| chr3 | 112307301 | 112309629 | NKX3-1 | islet | 112307658 | 112307901 |
| chr3 | 112307301 | 112309629 | NR3C1 | SUM159PT | 112308233 | 112308708 |
| chr3 | 112301606 | 112305477 | ONECUT1 | H9,pancreatic-progenitor | 112303814 | 112304244 |
| chr3 | 112301606 | 112305477 | OTX2 | retina | 112303234 | 112303395 |
| chr3 | 112301606 | 112305477 | PGR | myometrium | 112303531 | 112304037 |
| chr3 | 112307301 | 112309629 | PGR | AB32 | 112308137 | 112308566 |
| chr3 | 112301606 | 112305477 | PHF8 | WA01 | 112303087 | 112303221 |
| chr3 | 112307301 | 112309629 | PHOX2B | CLB-Ga | 112308855 | 112309078 |
| chr3 | 112301606 | 112305477 | PITX3 | SH-SY5Y | 112303107 | 112303943 |
| chr3 | 112301606 | 112305477 | POU2F3 | NCI-H1048 | 112301692 | 112301861 |
| chr3 | 112301606 | 112305477 | POU5F1 | SKM-1 | 112302479 | 112302770 |
| chr3 | 112301606 | 112305477 | POU5F1 | hiPSC,NCCIT,HUES-8,hESC,WA01 | 112303114 | 112303655 |
| chr3 | 112301606 | 112305477 | RELA | 786-O | 112302495 | 112302699 |
| chr3 | 112307301 | 112309629 | RELA | LNCaP | 112307630 | 112307790 |
| chr3 | 112307301 | 112309629 | RELA | IMR-90 | 112308271 | 112308615 |
| chr3 | 112307301 | 112309629 | RELA | SGBS,mammary-epithelial-cell | 112308392 | 112308803 |
| chr3 | 112307301 | 112309629 | RELA | HeLa-B2 | 112309377 | 112309478 |
| chr3 | 112301606 | 112305477 | REST | neural | 112304018 | 112304271 |
| chr3 | 112301606 | 112305477 | RUNX1T1 | Kasumi-1 | 112302566 | 112302722 |
| chr3 | 112301606 | 112305477 | RYBP | WA01 | 112303838 | 112304039 |
| chr3 | 112301606 | 112305477 | SAP30 | WA01 | 112303073 | 112303263 |
| chr3 | 112301606 | 112305477 | SAP30 | WA01 | 112303494 | 112303756 |
| chr3 | 112301606 | 112305477 | SIN3A | WA01 | 112303165 | 112303395 |
| chr3 | 112301606 | 112305477 | SIN3A | WA01 | 112303285 | 112303417 |
| chr3 | 112301606 | 112305477 | SIN3A | WA01 | 112303541 | 112303710 |
| chr3 | 112301606 | 112305477 | SMAD1 | BG03 | 112303180 | 112303277 |
| chr3 | 112301606 | 112305477 | SMAD2 | hESC | 112303054 | 112303364 |
| chr3 | 112301606 | 112305477 | SMAD3 | BG03 | 112303163 | 112303378 |
| chr3 | 112301606 | 112305477 | SMARCA4 | hiPSC,NGP | 112302456 | 112302693 |
| chr3 | 112301606 | 112305477 | SMARCA4 | 501-mel | 112302878 | 112303184 |
| chr3 | 112301606 | 112305477 | SMARCA4 | hiPSC | 112303116 | 112303464 |
| chr3 | 112301606 | 112305477 | SMARCA4 | 501-mel | 112303557 | 112304230 |
| chr3 | 112301606 | 112305477 | SMARCA4 | 501-mel | 112304318 | 112304672 |
| chr3 | 112301606 | 112305477 | SMARCA4 | 501-mel | 112304892 | 112305137 |
| chr3 | 112307301 | 112309629 | SMARCA4 | NPC,NSC | 112308235 | 112308526 |
| chr3 | 112301606 | 112305477 | SMARCB1 | hiPSC | 112302433 | 112302673 |
| chr3 | 112301606 | 112305477 | SMARCB1 | hiPSC | 112303150 | 112303429 |
| chr3 | 112301606 | 112305477 | SMARCC1 | hiPSC | 112302435 | 112302592 |
| chr3 | 112301606 | 112305477 | SMARCC1 | hiPSC | 112303163 | 112303456 |
| chr3 | 112301606 | 112305477 | SNAI2 | SMS-CTR | 112303117 | 112303317 |
| chr3 | 112301606 | 112305477 | SOX10 | 501-mel | 112303121 | 112303689 |
| chr3 | 112301606 | 112305477 | SOX21 | neuroepithelilal-cells | 112303059 | 112303523 |
| chr3 | 112301606 | 112305477 | SOX2 | HNSC | 112302190 | 112302493 |
| chr3 | 112301606 | 112305477 | SOX2 | HNSC,hESC,hiPSC | 112303160 | 112303539 |
| chr3 | 112307301 | 112309629 | SOX2 | NPC,HNSC | 112308119 | 112308536 |
| chr3 | 112301606 | 112305477 | SP1 | WA01 | 112303154 | 112303647 |
| chr3 | 112301606 | 112305477 | SP1 | WA01 | 112303901 | 112304037 |
| chr3 | 112301606 | 112305477 | SP4 | WA01 | 112303289 | 112303449 |
| chr3 | 112301606 | 112305477 | SPI1 | NCI-H929 | 112302516 | 112302694 |
| chr3 | 112301606 | 112305477 | SPI1 | NCI-H929 | 112302799 | 112302999 |
| chr3 | 112301606 | 112305477 | SPI1 | monocyte,DC | 112303958 | 112304082 |
| chr3 | 112301606 | 112305477 | SPI1 | monocyte,primary-B-cell | 112304081 | 112304336 |
| chr3 | 112301606 | 112305477 | STAT3 | monocyte | 112304184 | 112304321 |
| chr3 | 112307301 | 112309629 | STAT3 | breast-cancer,BT-474,MDA-MB-361 | 112307553 | 112307813 |
| chr3 | 112307301 | 112309629 | STAT3 | SUM159PT | 112308236 | 112308416 |
| chr3 | 112301606 | 112305477 | TAF1 | WA01 | 112302499 | 112302768 |
| chr3 | 112301606 | 112305477 | TAF1 | WA01 | 112303083 | 112304035 |
| chr3 | 112301606 | 112305477 | TAF7 | WA01 | 112303153 | 112303302 |
| chr3 | 112301606 | 112305477 | TAL1 | CD34,Jurkat,ProEs,PRIMA5,MOLT-3 | 112302120 | 112302314 |
| chr3 | 112307301 | 112309629 | TAL1 | PRIMA2 | 112308392 | 112308546 |
| chr3 | 112301606 | 112305477 | TBP | hESC | 112302631 | 112302765 |
| chr3 | 112301606 | 112305477 | TBP | hESC,WA01,hiPSC | 112303148 | 112303404 |
| chr3 | 112301606 | 112305477 | TCF12 | WA01 | 112303222 | 112303352 |
| chr3 | 112307301 | 112309629 | TCF21 | HCASMC | 112308215 | 112308579 |
| chr3 | 112301606 | 112305477 | TEAD1 | pancreas | 112303161 | 112303444 |
| chr3 | 112307301 | 112309629 | TEAD1 | adipocyte,HUCCT1 | 112308590 | 112308788 |
| chr3 | 112301606 | 112305477 | TEAD4 | BJ,hESC | 112303167 | 112303498 |
| chr3 | 112301606 | 112305477 | TFAP2C | UCLA1-hESCs | 112303360 | 112303638 |
| chr3 | 112301606 | 112305477 | TP53 | hESC,UACC-257,H9 | 112303185 | 112303469 |
| chr3 | 112307301 | 112309629 | TP53 | SaOS-2 | 112308249 | 112308464 |
| chr3 | 112301606 | 112305477 | TRIM22 | GM12878 | 112303794 | 112304065 |
| chr3 | 112301606 | 112305477 | TRIM28 | AF22,hESC | 112302345 | 112302764 |
| chr3 | 112301606 | 112305477 | TRIM28 | WIBR3 | 112302467 | 112302861 |
| chr3 | 112301606 | 112305477 | TRIM28 | WIBR3 | 112303045 | 112303405 |
| chr3 | 112307301 | 112309629 | TWIST1 | BE2C,SK-N-BE2-C | 112308207 | 112308379 |
| chr3 | 112301606 | 112305477 | YY1 | WA01 | 112303166 | 112303466 |
| chr3 | 112301606 | 112305477 | YY1 | GM12892,PK-LCLs,GM12891 | 112304135 | 112304328 |
| chr3 | 112301606 | 112305477 | ZBTB2 | GM12878 | 112303394 | 112303488 |
| chr3 | 112301606 | 112305477 | ZBTB7A | VCaP | 112302475 | 112302762 |
| chr3 | 112301606 | 112305477 | ZNF143 | WA01 | 112303103 | 112303399 |
| chr3 | 112301606 | 112305477 | ZNF143 | WA09 | 112303203 | 112303608 |
| chr3 | 112301606 | 112305477 | ZNF143 | GM12878,WA01 | 112303712 | 112304172 |
| chr3 | 112301606 | 112305477 | ZNF207 | WA09 | 112303141 | 112303392 |
| chr3 | 112301606 | 112305477 | ZNF341 | LBCL,HIES,HEK293 | 112302511 | 112302778 |
| chr3 | 112301606 | 112305477 | ZNF462 | GM23338 | 112302486 | 112302730 |
| chr3 | 112301606 | 112305477 | ZNF462 | GM23338 | 112303164 | 112303382 |