| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr3 | 12750064 | 12750782 | AFF1 | K-562 | 12750378 | 12750697 |
| chr3 | 12758107 | 12760714 | AFF4 | HeLa | 12758108 | 12758304 |
| chr3 | 12758107 | 12760714 | AFF4 | HeLa | 12759274 | 12759648 |
| chr3 | 12758107 | 12760714 | AHR | MCF-7 | 12760043 | 12760193 |
| chr3 | 12758107 | 12760714 | APC | HCT-116 | 12759406 | 12759813 |
| chr3 | 12750064 | 12750782 | AR | LNCaP-abl,prostate,LNCaP,myofibroblast | 12750308 | 12750563 |
| chr3 | 12750064 | 12750782 | AR | THP-1 | 12750569 | 12750756 |
| chr3 | 12758107 | 12760714 | AR | prostate | 12758136 | 12758351 |
| chr3 | 12758107 | 12760714 | AR | prostate | 12758402 | 12758819 |
| chr3 | 12758107 | 12760714 | AR | MCF-7,prostate,LNCaP | 12759243 | 12759453 |
| chr3 | 12758107 | 12760714 | AR | VCaP | 12759670 | 12759921 |
| chr3 | 12758107 | 12760714 | AR | breast | 12759971 | 12760235 |
| chr3 | 12763608 | 12764083 | AR | prostate | 12763615 | 12763813 |
| chr3 | 12758107 | 12760714 | ARID1A | endometrial-epithelial-cells | 12758410 | 12758690 |
| chr3 | 12758107 | 12760714 | ARID1A | RMG-I,MCF-7 | 12759318 | 12759731 |
| chr3 | 12758107 | 12760714 | ARID1A | MCF-7 | 12759581 | 12760359 |
| chr3 | 12758107 | 12760714 | ARNT | HCT-116,MCF-7 | 12759270 | 12759676 |
| chr3 | 12758107 | 12760714 | ARNT | MCF-7 | 12759316 | 12760463 |
| chr3 | 12750064 | 12750782 | ARNTL | U2OS | 12750212 | 12750782 |
| chr3 | 12750064 | 12750782 | ASCL1 | NCI-H889 | 12750378 | 12750487 |
| chr3 | 12750064 | 12750782 | ATF3 | HCT-116 | 12750291 | 12750434 |
| chr3 | 12753721 | 12753903 | ATF3 | HCT-116 | 12753730 | 12753887 |
| chr3 | 12758107 | 12760714 | ATF3 | HCT-116 | 12759243 | 12759685 |
| chr3 | 12758107 | 12760714 | ATF3 | HCT-116 | 12759539 | 12759638 |
| chr3 | 12750064 | 12750782 | BACH1 | SW1990,Hep-G2,WA01,AsPC-1,K-562,A-549 | 12750275 | 12750483 |
| chr3 | 12750064 | 12750782 | BACH2 | DOHH2,B-cell,OCI-Ly7 | 12750112 | 12750547 |
| chr3 | 12750064 | 12750782 | BCL6 | OCI-Ly1 | 12750265 | 12750438 |
| chr3 | 12750064 | 12750782 | BCOR | B-cell | 12750356 | 12750512 |
| chr3 | 12750064 | 12750782 | CBX3 | HCT-116 | 12750313 | 12750495 |
| chr3 | 12753721 | 12753903 | CBX3 | HCT-116 | 12753723 | 12753841 |
| chr3 | 12758107 | 12760714 | CEBPA | SKH1 | 12759870 | 12759997 |
| chr3 | 12753721 | 12753903 | CEBPB | MCF-7 | 12753777 | 12753892 |
| chr3 | 12758107 | 12760714 | CHD4 | keratinocyte | 12759598 | 12759844 |
| chr3 | 12758107 | 12760714 | CHD8 | T-47D | 12759228 | 12759450 |
| chr3 | 12750064 | 12750782 | CREB1 | A-549,LNCaP-abl | 12750323 | 12750552 |
| chr3 | 12758107 | 12760714 | CREB1 | MCF-7,A-549,Hep-G2 | 12759166 | 12759450 |
| chr3 | 12750064 | 12750782 | CREBBP | PC-3 | 12750430 | 12750549 |
| chr3 | 12758107 | 12760714 | CREBBP | PC-3 | 12758453 | 12758863 |
| chr3 | 12758107 | 12760714 | CREBBP | PC-3 | 12759046 | 12759235 |
| chr3 | 12758107 | 12760714 | CREBBP | PC-3,MCF-7,keratinocyte | 12759225 | 12759997 |
| chr3 | 12758107 | 12760714 | CREBBP | NCI-H3396 | 12759626 | 12759715 |
| chr3 | 12758107 | 12760714 | CREBBP | MCF-7,PC-3 | 12759710 | 12760122 |
| chr3 | 12758107 | 12760714 | CREBBP | PC-3 | 12760188 | 12760316 |
| chr3 | 12758107 | 12760714 | CRY1 | U2OS | 12760095 | 12760380 |
| chr3 | 12750064 | 12750782 | CTBP1 | K-562 | 12750228 | 12750531 |
| chr3 | 12758107 | 12760714 | CTBP1 | MCF-7 | 12759220 | 12759574 |
| chr3 | 12758107 | 12760714 | CTBP1 | MCF-7 | 12759851 | 12760617 |
| chr3 | 12750064 | 12750782 | CTCF | keratinocyte,SUM159,esophagus | 12750312 | 12750442 |
| chr3 | 12758107 | 12760714 | CTCF | SUM159 | 12758672 | 12758766 |
| chr3 | 12758107 | 12760714 | CTCF | T-47D,HeLa-S3,GSC23 | 12759256 | 12759587 |
| chr3 | 12750064 | 12750782 | DAXX | PC-3 | 12750293 | 12750464 |
| chr3 | 12758107 | 12760714 | DPF2 | MCF-7 | 12759229 | 12760357 |
| chr3 | 12758107 | 12760714 | DRAP1 | Hep-G2 | 12759281 | 12759422 |
| chr3 | 12750064 | 12750782 | E2F6 | A-549,K-562 | 12750348 | 12750520 |
| chr3 | 12758107 | 12760714 | EED | ProEs | 12758553 | 12758706 |
| chr3 | 12758107 | 12760714 | EGR1 | Hep-G2,HCT-116 | 12759408 | 12759645 |
| chr3 | 12750064 | 12750782 | EHF | A-549 | 12750263 | 12750551 |
| chr3 | 12758107 | 12760714 | EHF | RWPE-1 | 12758618 | 12758888 |
| chr3 | 12758107 | 12760714 | EHF | RWPE-1 | 12759076 | 12759701 |
| chr3 | 12750064 | 12750782 | EHMT2 | K-562 | 12750175 | 12750376 |
| chr3 | 12750064 | 12750782 | ELF1 | K-562,SK-N-MC,A-549 | 12750375 | 12750598 |
| chr3 | 12758107 | 12760714 | ELF1 | Hep-G2,MCF-7 | 12759241 | 12759624 |
| chr3 | 12758107 | 12760714 | ELF1 | MCF-7 | 12760100 | 12760245 |
| chr3 | 12750064 | 12750782 | ELL2 | HeLa | 12750335 | 12750518 |
| chr3 | 12758107 | 12760714 | ELL2 | HeLa | 12759195 | 12759520 |
| chr3 | 12750064 | 12750782 | EP300 | HeLa-S3,T-47D,SK-N-SH | 12750278 | 12750449 |
| chr3 | 12758107 | 12760714 | EP300 | MCF-7,T-47D,PC-3 | 12759333 | 12759800 |
| chr3 | 12758107 | 12760714 | EP300 | T-47D | 12760029 | 12760187 |
| chr3 | 12758107 | 12760714 | EP300 | PC-3 | 12760164 | 12760315 |
| chr3 | 12758107 | 12760714 | ERG | SKNO-1,aortic-endothelial-cell,MCF-7 | 12758594 | 12758796 |
| chr3 | 12758107 | 12760714 | ERG | SKNO-1,K-562,RWPE-1 | 12759249 | 12759547 |
| chr3 | 12750064 | 12750782 | ESR1 | primary-breast-cancer,MCF-7,T-47D,Ishikawa | 12750226 | 12750520 |
| chr3 | 12758107 | 12760714 | ESR1 | primary-breast-cancer,T-47D,Ishikawa | 12758515 | 12758778 |
| chr3 | 12758107 | 12760714 | ESR1 | primary-breast-cancer,MCF-7,SUM44PE,breast,T-47D,Ishikawa | 12759281 | 12759630 |
| chr3 | 12758107 | 12760714 | ESR1 | primary-breast-cancer,MCF-7,breast,T-47D,T-47D-B,Ishikawa | 12759915 | 12760272 |
| chr3 | 12758107 | 12760714 | ESRRA | SK-BR-3 | 12759335 | 12759742 |
| chr3 | 12758107 | 12760714 | ESRRA | SK-BR-3,MCF-7 | 12759744 | 12760394 |
| chr3 | 12750064 | 12750782 | ETS1 | 786-O | 12750296 | 12750581 |
| chr3 | 12758107 | 12760714 | ETS1 | HUVEC-C | 12758336 | 12758634 |
| chr3 | 12758107 | 12760714 | ETS1 | SCC-25 | 12759243 | 12759835 |
| chr3 | 12763608 | 12764083 | ETS1 | HUVEC-C | 12763615 | 12763846 |
| chr3 | 12758107 | 12760714 | ETV1 | LNCaP | 12759311 | 12759403 |
| chr3 | 12758107 | 12760714 | ETV4 | T-47D | 12759256 | 12759739 |
| chr3 | 12758107 | 12760714 | ETV4 | T-47D | 12759845 | 12760143 |
| chr3 | 12758107 | 12760714 | FLI1 | SKNO-1 | 12758369 | 12758667 |
| chr3 | 12758107 | 12760714 | FLI1 | SKNO-1 | 12759274 | 12759535 |
| chr3 | 12758107 | 12760714 | FOS | K-562,MCF-7,MCF-10A | 12759264 | 12759646 |
| chr3 | 12750064 | 12750782 | FOSL1 | BT-549 | 12750243 | 12750468 |
| chr3 | 12750064 | 12750782 | FOSL2 | NPC,SK-N-SH | 12750272 | 12750508 |
| chr3 | 12758107 | 12760714 | FOXA1 | LNCaP,primary-breast-cancer | 12758168 | 12758400 |
| chr3 | 12758107 | 12760714 | FOXA1 | breast | 12758386 | 12758582 |
| chr3 | 12758107 | 12760714 | FOXA1 | T-47D,MCF-7-TAMR-1,MCF-7,primary-breast-cancer | 12759161 | 12759461 |
| chr3 | 12758107 | 12760714 | FOXA1 | T-47D,pancreatic-progenitor,LNCaP,breast,MCF-7,primary-breast-cancer,breast-cancer | 12760003 | 12760298 |
| chr3 | 12758107 | 12760714 | FOXA2 | pancreatic-progenitor | 12760071 | 12760359 |
| chr3 | 12750064 | 12750782 | FOXL2 | HGrC1 | 12750346 | 12750512 |
| chr3 | 12758107 | 12760714 | GABPA | MCF-7 | 12759249 | 12759430 |
| chr3 | 12750064 | 12750782 | GATA2 | primary-endometrial-stromal-cell | 12750232 | 12750546 |
| chr3 | 12758107 | 12760714 | GATA2 | hiPSC | 12759379 | 12759585 |
| chr3 | 12750064 | 12750782 | GATA3 | T-47D | 12750212 | 12750451 |
| chr3 | 12758107 | 12760714 | GATA3 | MCF-7,T-47D | 12759971 | 12760234 |
| chr3 | 12758107 | 12760714 | GATA6 | YCC-3,OACP4-C | 12759213 | 12759523 |
| chr3 | 12758107 | 12760714 | GATAD2B | MCF-7,GM12878 | 12759912 | 12760194 |
| chr3 | 12750064 | 12750782 | GFI1B | K-562 | 12750308 | 12750592 |
| chr3 | 12758107 | 12760714 | GLIS2 | HEK293 | 12758457 | 12758757 |
| chr3 | 12758107 | 12760714 | GLIS2 | HEK293 | 12759207 | 12759748 |
| chr3 | 12758107 | 12760714 | GRHL1 | MCF-7 | 12759367 | 12759588 |
| chr3 | 12758107 | 12760714 | GRHL1 | MCF-7 | 12759901 | 12760369 |
| chr3 | 12750064 | 12750782 | GTF2B | HeLa | 12750262 | 12750435 |
| chr3 | 12750064 | 12750782 | GTF3C2 | T98G | 12750109 | 12750759 |
| chr3 | 12750064 | 12750782 | HDAC1 | K-562 | 12750305 | 12750574 |
| chr3 | 12758107 | 12760714 | HDAC1 | MCF-7,PC-3 | 12759299 | 12759786 |
| chr3 | 12758107 | 12760714 | HDAC1 | PC-3 | 12759730 | 12760036 |
| chr3 | 12750064 | 12750782 | HDAC2 | K-562 | 12750169 | 12750557 |
| chr3 | 12750064 | 12750782 | HDAC2 | PC-3 | 12750436 | 12750584 |
| chr3 | 12758107 | 12760714 | HDAC2 | PC-3 | 12758223 | 12758346 |
| chr3 | 12758107 | 12760714 | HDAC2 | PC-3 | 12758468 | 12758763 |
| chr3 | 12758107 | 12760714 | HDAC2 | PC-3 | 12759435 | 12760060 |
| chr3 | 12758107 | 12760714 | HDAC2 | MCF-7 | 12760016 | 12760309 |
| chr3 | 12758107 | 12760714 | HDAC2 | PC-3 | 12760188 | 12760586 |
| chr3 | 12758107 | 12760714 | HDAC8 | K-562 | 12759020 | 12759475 |
| chr3 | 12750064 | 12750782 | HIF1A | BEAS-2B,PC-3,U2OS,RCC10 | 12750295 | 12750658 |
| chr3 | 12758107 | 12760714 | HIF1A | BEAS-2B | 12759204 | 12759639 |
| chr3 | 12758107 | 12760714 | HIF3A | Hep-3B2-1-7 | 12759102 | 12759965 |
| chr3 | 12758107 | 12760714 | HIVEP1 | Hep-G2 | 12759409 | 12759829 |
| chr3 | 12750064 | 12750782 | HOXB5 | A-549 | 12750261 | 12750615 |
| chr3 | 12758107 | 12760714 | IRF1 | HAEC | 12760371 | 12760502 |
| chr3 | 12758107 | 12760714 | IRF2 | keratinocyte | 12758118 | 12758482 |
| chr3 | 12758107 | 12760714 | IRF2 | keratinocyte | 12759294 | 12759963 |
| chr3 | 12750064 | 12750782 | IRF4 | T-cell | 12750236 | 12750474 |
| chr3 | 12758107 | 12760714 | JUNB | keratinocyte | 12759292 | 12759709 |
| chr3 | 12750064 | 12750782 | JUND | Hep-G2,K-562,SK-N-SH | 12750294 | 12750483 |
| chr3 | 12758107 | 12760714 | JUND | GP5D | 12759312 | 12759607 |
| chr3 | 12758107 | 12760714 | JUND | GP5D | 12759842 | 12760136 |
| chr3 | 12750064 | 12750782 | JUN | MDA-BoM-1833 | 12750282 | 12750512 |
| chr3 | 12758107 | 12760714 | JUN | MDA-BoM-1833 | 12758453 | 12758766 |
| chr3 | 12758107 | 12760714 | JUN | MDA-MB-231,MCF-7,MCF10A-Er-Src,MDA-BoM-1833 | 12759267 | 12759646 |
| chr3 | 12758107 | 12760714 | KLF3 | keratinocyte | 12758478 | 12758753 |
| chr3 | 12758107 | 12760714 | KLF3 | keratinocyte | 12758995 | 12760337 |
| chr3 | 12758107 | 12760714 | KLF4 | keratinocyte | 12759284 | 12759747 |
| chr3 | 12758107 | 12760714 | KLF5 | HEK293 | 12758147 | 12758354 |
| chr3 | 12758107 | 12760714 | KLF5 | ESO-26,HCC95 | 12759201 | 12759614 |
| chr3 | 12758107 | 12760714 | KLF9 | GBM1A | 12758655 | 12758774 |
| chr3 | 12750064 | 12750782 | LMO1 | Jurkat | 12750405 | 12750694 |
| chr3 | 12750064 | 12750782 | MAFB | islet | 12750250 | 12750535 |
| chr3 | 12750064 | 12750782 | MAFF | K-562,HeLa-S3 | 12750256 | 12750466 |
| chr3 | 12750064 | 12750782 | MAFG | K-562 | 12750109 | 12750605 |
| chr3 | 12758107 | 12760714 | MAF | keratinocyte | 12759370 | 12759565 |
| chr3 | 12750064 | 12750782 | MAFK | OCI-Ly7,K-562,Hep-G2,WA01,HeLa-S3 | 12750246 | 12750461 |
| chr3 | 12758107 | 12760714 | MAML1 | SCC | 12759204 | 12760240 |
| chr3 | 12750064 | 12750782 | MAX | A-549,HCT-116,NCI-H2171,Hep-G2,HeLa-S3,Ishikawa,MDA-MB-231,K-562,liver,SK-N-SH,P493-6 | 12750351 | 12750689 |
| chr3 | 12758107 | 12760714 | MAX | NCI-H2171 | 12758476 | 12758783 |
| chr3 | 12758107 | 12760714 | MAX | MCF-7,NCI-H2171,HCT-116,Hep-G2,MDA-MB-231 | 12759336 | 12759772 |
| chr3 | 12758107 | 12760714 | MAZ | IMR-90,HEK293 | 12758373 | 12758712 |
| chr3 | 12758107 | 12760714 | MAZ | MCF-7 | 12759279 | 12759630 |
| chr3 | 12758107 | 12760714 | MAZ | HEK293 | 12759489 | 12759794 |
| chr3 | 12758107 | 12760714 | MBD2 | MCF-7 | 12759207 | 12759511 |
| chr3 | 12758107 | 12760714 | MBD3 | MCF-7 | 12758820 | 12759001 |
| chr3 | 12758107 | 12760714 | MBD3 | MCF-7 | 12759182 | 12759325 |
| chr3 | 12758107 | 12760714 | MBD3 | MCF-7 | 12759642 | 12759779 |
| chr3 | 12758107 | 12760714 | MBD3 | MCF-7 | 12759900 | 12760050 |
| chr3 | 12750064 | 12750782 | MEF2B | tonsil,DOHH2 | 12750356 | 12750552 |
| chr3 | 12758107 | 12760714 | MEF2B | GM12878 | 12759615 | 12760115 |
| chr3 | 12758107 | 12760714 | MNT | MCF-7 | 12759137 | 12759834 |
| chr3 | 12758107 | 12760714 | MSX2 | MCF-7 | 12759306 | 12759469 |
| chr3 | 12758107 | 12760714 | MTA1 | MCF-7 | 12759944 | 12760265 |
| chr3 | 12750064 | 12750782 | MTA3 | K-562 | 12750449 | 12750768 |
| chr3 | 12750064 | 12750782 | MXI1 | IMR-90 | 12750374 | 12750509 |
| chr3 | 12750064 | 12750782 | MYC | K-562,MCF-10A,NCI-H128,NCI-H2171,HFF,U2OS,P493-6 | 12750332 | 12750562 |
| chr3 | 12758107 | 12760714 | MYC | MCF-10A,NCI-H128,NCI-H2171,MCF-7,GP5D,U2OS | 12759350 | 12759791 |
| chr3 | 12758107 | 12760714 | MYC | P493-6 | 12759821 | 12760009 |
| chr3 | 12758107 | 12760714 | MYC | P493-6 | 12759907 | 12760211 |
| chr3 | 12750064 | 12750782 | MYCN | SH-EP,SHEP-21N,LNCaP | 12750300 | 12750513 |
| chr3 | 12758107 | 12760714 | MYCN | SHEP-21N | 12758109 | 12758249 |
| chr3 | 12758107 | 12760714 | MYNN | Hep-G2 | 12759705 | 12760021 |
| chr3 | 12750064 | 12750782 | MYOD1 | rhabdomyosarcoma,myoblast,RH30,RD,IMR-90,RH4 | 12750305 | 12750543 |
| chr3 | 12758107 | 12760714 | MYOD1 | IMR-90 | 12758402 | 12758797 |
| chr3 | 12758107 | 12760714 | MYOD1 | IMR-90 | 12759144 | 12759678 |
| chr3 | 12758107 | 12760714 | NCOA2 | MCF-7 | 12759523 | 12759656 |
| chr3 | 12758107 | 12760714 | NCOA2 | MCF-7 | 12759697 | 12759834 |
| chr3 | 12758107 | 12760714 | NCOA2 | MCF-7 | 12759871 | 12760002 |
| chr3 | 12750064 | 12750782 | NCOR2 | LS180 | 12750323 | 12750423 |
| chr3 | 12750064 | 12750782 | NEUROG2 | MRC-5 | 12750310 | 12750572 |
| chr3 | 12750064 | 12750782 | NFE2 | K-562 | 12750208 | 12750513 |
| chr3 | 12750064 | 12750782 | NFE2L1 | K-562 | 12750188 | 12750531 |
| chr3 | 12750064 | 12750782 | NFE2L2 | BEAS-2B,K-562,HeLa-S3,A-549,Hep-G2,HAEC,IMR-90 | 12750187 | 12750609 |
| chr3 | 12750064 | 12750782 | NFIC | Ishikawa,SK-N-SH | 12750248 | 12750492 |
| chr3 | 12758107 | 12760714 | NFIC | SK-N-SH | 12758421 | 12758777 |
| chr3 | 12753721 | 12753903 | NFKB1 | MCF10A-Er-Src | 12753752 | 12753872 |
| chr3 | 12758107 | 12760714 | NFKB1 | HEK293T | 12758570 | 12758763 |
| chr3 | 12758107 | 12760714 | NFKB1 | MCF10A-Er-Src,HEK293T | 12759374 | 12759536 |
| chr3 | 12758107 | 12760714 | NFKB1 | HEK293T | 12760209 | 12760559 |
| chr3 | 12758107 | 12760714 | NFKB1 | HEK293T | 12760375 | 12760577 |
| chr3 | 12758107 | 12760714 | NFKBIZ | Hep-G2 | 12758137 | 12758264 |
| chr3 | 12750064 | 12750782 | NKX3-1 | islet | 12750298 | 12750547 |
| chr3 | 12758107 | 12760714 | NR2F2 | MCF-7 | 12760002 | 12760193 |
| chr3 | 12763608 | 12764083 | NR2F2 | K-562 | 12763652 | 12763772 |
| chr3 | 12750064 | 12750782 | NR3C1 | SUM159PT,MDA-MB-231,BEAS-2B | 12750248 | 12750637 |
| chr3 | 12758107 | 12760714 | NR3C1 | BEAS-2B | 12758456 | 12758717 |
| chr3 | 12758107 | 12760714 | NR3C1 | BEAS-2B,HCC1937,T47D-A1-2,A-549,MCF-10A,SUM159PT | 12759252 | 12759749 |
| chr3 | 12758107 | 12760714 | NR3C1 | T47D-A1-2 | 12759713 | 12760205 |
| chr3 | 12750064 | 12750782 | NR5A2 | A-549 | 12750289 | 12750639 |
| chr3 | 12758107 | 12760714 | NRF1 | HMEC-1,HCC1954 | 12759240 | 12759729 |
| chr3 | 12758107 | 12760714 | NRIP1 | MCF-7 | 12759343 | 12759501 |
| chr3 | 12758107 | 12760714 | NRIP1 | MCF-7 | 12759761 | 12759956 |
| chr3 | 12758107 | 12760714 | NRIP1 | MCF-7 | 12760003 | 12760216 |
| chr3 | 12758107 | 12760714 | OVOL1 | MCF-7 | 12759377 | 12759550 |
| chr3 | 12758107 | 12760714 | PARP1 | MCF-10A | 12759584 | 12760227 |
| chr3 | 12750064 | 12750782 | PAX5 | fetal | 12750143 | 12750308 |
| chr3 | 12750064 | 12750782 | PBX1 | A-549 | 12750298 | 12750517 |
| chr3 | 12750064 | 12750782 | PGR | T-47D | 12750262 | 12750436 |
| chr3 | 12758107 | 12760714 | PGR | MCF-7,T-47D | 12759222 | 12759661 |
| chr3 | 12758107 | 12760714 | PGR | MCF-7,T-47D | 12759935 | 12760316 |
| chr3 | 12758107 | 12760714 | PKNOX1 | MCF-7 | 12759108 | 12759596 |
| chr3 | 12758107 | 12760714 | PKNOX1 | MCF-7 | 12760005 | 12760217 |
| chr3 | 12758107 | 12760714 | PLAG1 | K-562 | 12758451 | 12758689 |
| chr3 | 12758107 | 12760714 | PLAG1 | K-562 | 12759178 | 12759370 |
| chr3 | 12758107 | 12760714 | PLAG1 | K-562 | 12759439 | 12759979 |
| chr3 | 12750064 | 12750782 | POU2F1 | T-47D | 12750096 | 12750475 |
| chr3 | 12758107 | 12760714 | POU2F1 | T-47D | 12759288 | 12760048 |
| chr3 | 12758107 | 12760714 | POU5F1 | SKM-1 | 12758487 | 12758760 |
| chr3 | 12758107 | 12760714 | POU5F1 | hiPSC | 12759885 | 12760093 |
| chr3 | 12758107 | 12760714 | PRDM10 | Hep-G2 | 12759236 | 12759703 |
| chr3 | 12750064 | 12750782 | PRDM1 | A-549 | 12750280 | 12750521 |
| chr3 | 12758107 | 12760714 | RBBP4 | RH5 | 12760297 | 12760517 |
| chr3 | 12750064 | 12750782 | RELA | HeLa-B2,SW480 | 12750336 | 12750538 |
| chr3 | 12758107 | 12760714 | RELA | aortic-endothelial-cell,FaDu | 12758491 | 12758712 |
| chr3 | 12758107 | 12760714 | RELA | Detroit-562,SGBS,FaDu,GM12878,MCF-7 | 12759418 | 12759779 |
| chr3 | 12758107 | 12760714 | RELB | GM12878 | 12759731 | 12760031 |
| chr3 | 12750064 | 12750782 | REST | A-549 | 12750323 | 12750504 |
| chr3 | 12758107 | 12760714 | REST | MCF-7 | 12759334 | 12759720 |
| chr3 | 12758107 | 12760714 | RFX1 | MCF-7 | 12759340 | 12759597 |
| chr3 | 12758107 | 12760714 | RFX1 | MCF-7 | 12760155 | 12760581 |
| chr3 | 12750064 | 12750782 | RNF2 | fibroblast,K-562 | 12750316 | 12750525 |
| chr3 | 12758107 | 12760714 | RUNX1 | AML,CD34 | 12758455 | 12758636 |
| chr3 | 12750064 | 12750782 | SIN3A | A-549,HCT-116,SK-N-SH | 12750282 | 12750545 |
| chr3 | 12758107 | 12760714 | SIN3A | MCF-7 | 12759219 | 12759591 |
| chr3 | 12758107 | 12760714 | SIN3A | MCF-7 | 12759833 | 12760159 |
| chr3 | 12758107 | 12760714 | SMAD1 | BG03 | 12759192 | 12759288 |
| chr3 | 12758107 | 12760714 | SMAD3 | HMLE,HCC1954 | 12759161 | 12760122 |
| chr3 | 12750064 | 12750782 | SMARCA4 | K-562,Aska-SS,BIN-67,endometrial-epithelial-cells,A-549 | 12750254 | 12750550 |
| chr3 | 12758107 | 12760714 | SMARCA4 | BIN-67 | 12758151 | 12758868 |
| chr3 | 12758107 | 12760714 | SMARCA4 | MCF-7,BIN-67 | 12759447 | 12759751 |
| chr3 | 12758107 | 12760714 | SMARCA4 | MCF-7 | 12759677 | 12760270 |
| chr3 | 12758107 | 12760714 | SMARCA5 | GM12878 | 12759448 | 12759660 |
| chr3 | 12758107 | 12760714 | SMARCA5 | MCF-7 | 12759697 | 12760018 |
| chr3 | 12758107 | 12760714 | SMARCB1 | HeLa-S3 | 12759215 | 12759395 |
| chr3 | 12758107 | 12760714 | SMARCB1 | MCF-7 | 12759234 | 12760344 |
| chr3 | 12758107 | 12760714 | SMARCC1 | MCF-7 | 12759902 | 12760196 |
| chr3 | 12758107 | 12760714 | SMARCD3 | MCF-7 | 12759205 | 12759497 |
| chr3 | 12758107 | 12760714 | SMARCD3 | MCF-7 | 12759931 | 12760292 |
| chr3 | 12758107 | 12760714 | SMARCE1 | MCF-7 | 12759348 | 12760284 |
| chr3 | 12750064 | 12750782 | SNAI2 | PC-9,SMS-CTR,keratinocyte | 12750318 | 12750581 |
| chr3 | 12758107 | 12760714 | SNAI2 | PC-9 | 12758150 | 12758858 |
| chr3 | 12758107 | 12760714 | SNAI2 | PC-9 | 12759049 | 12760102 |
| chr3 | 12758107 | 12760714 | SNAI2 | PC-9,keratinocyte | 12759143 | 12759546 |
| chr3 | 12758107 | 12760714 | SOX2 | TT | 12759453 | 12759607 |
| chr3 | 12750064 | 12750782 | SOX6 | K-562 | 12750338 | 12750581 |
| chr3 | 12750064 | 12750782 | SP1 | A-549 | 12750305 | 12750468 |
| chr3 | 12758107 | 12760714 | SP1 | HCT-116,Hep-G2 | 12759254 | 12759540 |
| chr3 | 12758107 | 12760714 | SP3 | HEK293 | 12759186 | 12759532 |
| chr3 | 12758107 | 12760714 | SP7 | HEK293 | 12758163 | 12758442 |
| chr3 | 12758107 | 12760714 | SP7 | HEK293 | 12759247 | 12759704 |
| chr3 | 12758107 | 12760714 | SPDEF | MCF-7 | 12759315 | 12759691 |
| chr3 | 12750064 | 12750782 | SPI1 | U-937,OCI-Ly7 | 12750407 | 12750576 |
| chr3 | 12758107 | 12760714 | SPI1 | primary-neutrophil,NB4,K-562 | 12760304 | 12760446 |
| chr3 | 12758107 | 12760714 | SRF | GM12878,Ishikawa,HCT-116 | 12758234 | 12758511 |
| chr3 | 12758107 | 12760714 | STAT1 | FaDu | 12759208 | 12759816 |
| chr3 | 12750064 | 12750782 | STAT3 | HCC1187,MDA-MB-231,HCC1937,MDA-MB-468,MDA-MB-157,MCF10A-Er-Src,T-47D,HCC70,MDA-MB-453 | 12750280 | 12750521 |
| chr3 | 12758107 | 12760714 | STAT3 | HCC70 | 12758600 | 12758857 |
| chr3 | 12758107 | 12760714 | STAT3 | HCC1187,BT-474,HCC1937,FaDu,MDA-MB-468,MCF-7,MDA-MB-361,SUM159PT,MCF-10A,T-47D,HCC1143,HCC70 | 12759297 | 12759717 |
| chr3 | 12758107 | 12760714 | STAT3 | HCC1187,MCF-7,T-47D | 12759989 | 12760286 |
| chr3 | 12750064 | 12750782 | SUPT5H | HeLa | 12750368 | 12750532 |
| chr3 | 12758107 | 12760714 | SUPT5H | HeLa | 12758572 | 12758764 |
| chr3 | 12758107 | 12760714 | SUPT5H | HCT-116,HeLa | 12759250 | 12759746 |
| chr3 | 12758107 | 12760714 | SUPT5H | HeLa | 12760069 | 12760468 |
| chr3 | 12758107 | 12760714 | SUPT6H | HCT-116 | 12759454 | 12760562 |
| chr3 | 12758107 | 12760714 | TAF15 | K-562 | 12758523 | 12758736 |
| chr3 | 12758107 | 12760714 | TAF1 | WA01,GM12878 | 12758129 | 12758244 |
| chr3 | 12758107 | 12760714 | TARDBP | K-562 | 12759474 | 12759645 |
| chr3 | 12758107 | 12760714 | TARDBP | GM12878 | 12759694 | 12760111 |
| chr3 | 12758107 | 12760714 | TBX5 | G296S | 12758317 | 12758521 |
| chr3 | 12758107 | 12760714 | TBX5 | G296S,cardiomyocyte | 12758695 | 12759122 |
| chr3 | 12758107 | 12760714 | TBX5 | G296S,cardiomyocyte | 12759167 | 12759676 |
| chr3 | 12758107 | 12760714 | TBX5 | G296S | 12759516 | 12760444 |
| chr3 | 12758107 | 12760714 | TBX5 | G296S | 12759867 | 12760181 |
| chr3 | 12758107 | 12760714 | TBX5 | cardiomyocyte | 12760397 | 12760645 |
| chr3 | 12750064 | 12750782 | TCF12 | A-549 | 12750310 | 12750503 |
| chr3 | 12750064 | 12750782 | TCF3 | GM12878 | 12750375 | 12750537 |
| chr3 | 12750064 | 12750782 | TEAD1 | adipocyte | 12750162 | 12750514 |
| chr3 | 12758107 | 12760714 | TEAD1 | HUCCT1,keratinocyte | 12759222 | 12759724 |
| chr3 | 12750064 | 12750782 | TEAD4 | hMSC-TERT4,PC-9,SNU-216,T-47D,SK-MEL-147,Ishikawa | 12750208 | 12750465 |
| chr3 | 12758107 | 12760714 | TEAD4 | PC-9,MCF-7,T-47D,SNU-216 | 12759254 | 12759648 |
| chr3 | 12758107 | 12760714 | TFAP2A | MCF-7,WA09 | 12759300 | 12759570 |
| chr3 | 12758107 | 12760714 | TFAP2A | MCF-7,WA09 | 12760084 | 12760239 |
| chr3 | 12758107 | 12760714 | TFAP2C | UCLA1-hESCs | 12758518 | 12758753 |
| chr3 | 12758107 | 12760714 | TFAP2C | UCLA1-hESCs | 12758820 | 12759060 |
| chr3 | 12758107 | 12760714 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 12759209 | 12759780 |
| chr3 | 12758107 | 12760714 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 12760013 | 12760270 |
| chr3 | 12758107 | 12760714 | T | H9 | 12760124 | 12760418 |
| chr3 | 12750064 | 12750782 | TP53 | SW480 | 12750318 | 12750544 |
| chr3 | 12758107 | 12760714 | TP53 | HCT-116,U2OS,MCF-7,MCF-10A,SW480,SaOS-2,keratinocyte | 12759279 | 12759608 |
| chr3 | 12758107 | 12760714 | TP73 | SaOS-2 | 12759293 | 12759796 |
| chr3 | 12750064 | 12750782 | TRIM22 | GM12878 | 12750402 | 12750703 |
| chr3 | 12758107 | 12760714 | TRIM25 | MDA-MB-231 | 12759426 | 12759713 |
| chr3 | 12758107 | 12760714 | TRPS1 | T-47D | 12759302 | 12759432 |
| chr3 | 12758107 | 12760714 | TWIST1 | SHEP-21N | 12758612 | 12758763 |
| chr3 | 12758107 | 12760714 | UBTF | K-562 | 12759299 | 12759402 |
| chr3 | 12750064 | 12750782 | USF1 | Ishikawa | 12750304 | 12750417 |
| chr3 | 12758107 | 12760714 | USF1 | HCT-116,Hep-G2 | 12759550 | 12759684 |
| chr3 | 12750064 | 12750782 | USF2 | HeLa-S3 | 12750362 | 12750502 |
| chr3 | 12758107 | 12760714 | USF2 | K-562 | 12758417 | 12758769 |
| chr3 | 12758107 | 12760714 | USF2 | K-562 | 12759576 | 12759884 |
| chr3 | 12758107 | 12760714 | VDR | primary-prostate-epithelial-cell | 12759121 | 12759684 |
| chr3 | 12758107 | 12760714 | WT1 | HEK293 | 12758183 | 12758417 |
| chr3 | 12750064 | 12750782 | XBP1 | LNCaP | 12750252 | 12750577 |
| chr3 | 12750064 | 12750782 | YY1 | RH4,SK-N-SH,Ishikawa,HCT-116,A-549,Hep-G2,K-562 | 12750276 | 12750485 |
| chr3 | 12758107 | 12760714 | YY1 | HCT-116 | 12759282 | 12759418 |
| chr3 | 12758107 | 12760714 | YY1 | HCT-116 | 12759529 | 12759683 |
| chr3 | 12758107 | 12760714 | ZBTB6 | HEK293 | 12758156 | 12758691 |
| chr3 | 12758107 | 12760714 | ZBTB7A | Ishikawa | 12758505 | 12758667 |
| chr3 | 12758107 | 12760714 | ZBTB7B | MCF-7 | 12759295 | 12759598 |
| chr3 | 12758107 | 12760714 | ZBTB7B | MCF-7 | 12759947 | 12760226 |
| chr3 | 12758107 | 12760714 | ZFX | HCT-116,MCF-7 | 12759282 | 12759931 |
| chr3 | 12750064 | 12750782 | ZNF143 | MCF-7,Hep-G2 | 12750268 | 12750486 |
| chr3 | 12758107 | 12760714 | ZNF143 | FLP76,MCF-7,FLP143HA | 12759268 | 12759616 |
| chr3 | 12758107 | 12760714 | ZNF189 | HEK293 | 12760286 | 12760666 |
| chr3 | 12758107 | 12760714 | ZNF217 | Hep-G2 | 12759203 | 12759411 |
| chr3 | 12758107 | 12760714 | ZNF217 | MCF-7 | 12759832 | 12760396 |
| chr3 | 12758107 | 12760714 | ZNF24 | MCF-7 | 12759338 | 12759554 |
| chr3 | 12758107 | 12760714 | ZNF257 | HEK293T | 12759152 | 12759275 |
| chr3 | 12758107 | 12760714 | ZNF317 | HEK293 | 12758568 | 12758724 |
| chr3 | 12758107 | 12760714 | ZNF341 | HEK293 | 12760230 | 12760504 |
| chr3 | 12758107 | 12760714 | ZNF35 | HEK293 | 12758258 | 12758397 |
| chr3 | 12758107 | 12760714 | ZNF366 | HEK293 | 12759369 | 12759762 |
| chr3 | 12758107 | 12760714 | ZNF398 | HEK293 | 12758135 | 12758868 |
| chr3 | 12758107 | 12760714 | ZNF398 | HEK293 | 12759150 | 12759828 |
| chr3 | 12750064 | 12750782 | ZNF407 | Hep-G2 | 12750296 | 12750454 |
| chr3 | 12750064 | 12750782 | ZNF554 | HEK293 | 12750352 | 12750507 |
| chr3 | 12758107 | 12760714 | ZNF573 | HEK293T | 12759194 | 12759426 |
| chr3 | 12758107 | 12760714 | ZNF592 | MCF-7 | 12759119 | 12759781 |
| chr3 | 12758107 | 12760714 | ZNF592 | MCF-7 | 12759964 | 12760213 |