| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr3 | 12757335 | 12765268 | ADNP | K-562 | 12764269 | 12764849 |
| chr3 | 12749189 | 12754722 | AFF1 | K-562 | 12750378 | 12750697 |
| chr3 | 12749189 | 12754722 | AFF4 | HeLa | 12751622 | 12751850 |
| chr3 | 12757335 | 12765268 | AFF4 | HeLa | 12758108 | 12758304 |
| chr3 | 12757335 | 12765268 | AFF4 | HeLa | 12759274 | 12759648 |
| chr3 | 12757335 | 12765268 | AFF4 | HeLa | 12763381 | 12763634 |
| chr3 | 12749189 | 12754722 | AHR | GM01310 | 12749594 | 12749709 |
| chr3 | 12749189 | 12754722 | AHR | MCF-7 | 12751600 | 12751841 |
| chr3 | 12749189 | 12754722 | AHR | MCF-7 | 12753748 | 12753970 |
| chr3 | 12757335 | 12765268 | AHR | MCF-7 | 12760043 | 12760193 |
| chr3 | 12757335 | 12765268 | AHR | MCF-7 | 12763307 | 12763642 |
| chr3 | 12757335 | 12765268 | APC | HCT-116 | 12759406 | 12759813 |
| chr3 | 12749189 | 12754722 | AR | LNCaP-abl,prostate,LNCaP,myofibroblast | 12750308 | 12750563 |
| chr3 | 12749189 | 12754722 | AR | THP-1 | 12750569 | 12750756 |
| chr3 | 12749189 | 12754722 | AR | prostate | 12750943 | 12751213 |
| chr3 | 12757335 | 12765268 | AR | prostate | 12758136 | 12758351 |
| chr3 | 12757335 | 12765268 | AR | prostate | 12758402 | 12758819 |
| chr3 | 12757335 | 12765268 | AR | MCF-7,prostate,LNCaP | 12759243 | 12759453 |
| chr3 | 12757335 | 12765268 | AR | VCaP | 12759670 | 12759921 |
| chr3 | 12757335 | 12765268 | AR | breast | 12759971 | 12760235 |
| chr3 | 12757335 | 12765268 | AR | myofibroblast,endometrial-stromal-cell,THP-1,fibroblast,MCF-7,PC-3 | 12763343 | 12763587 |
| chr3 | 12757335 | 12765268 | AR | prostate | 12763615 | 12763813 |
| chr3 | 12749189 | 12754722 | ARID1A | endometrial-epithelial-cells,12Z | 12750165 | 12750959 |
| chr3 | 12749189 | 12754722 | ARID1A | 12Z | 12751553 | 12752009 |
| chr3 | 12749189 | 12754722 | ARID1A | 12Z | 12753011 | 12753133 |
| chr3 | 12749189 | 12754722 | ARID1A | 12Z,MCF-7 | 12753591 | 12754007 |
| chr3 | 12757335 | 12765268 | ARID1A | endometrial-epithelial-cells | 12758410 | 12758690 |
| chr3 | 12757335 | 12765268 | ARID1A | RMG-I,MCF-7 | 12759318 | 12759731 |
| chr3 | 12757335 | 12765268 | ARID1A | MCF-7 | 12759581 | 12760359 |
| chr3 | 12757335 | 12765268 | ARID1A | RMG-I,endometrial-epithelial-cells,12Z,MCF-7 | 12763304 | 12763770 |
| chr3 | 12749189 | 12754722 | ARID1B | K-562 | 12750627 | 12750833 |
| chr3 | 12757335 | 12765268 | ARID1B | K-562 | 12763325 | 12763613 |
| chr3 | 12749189 | 12754722 | ARID3A | GM12878 | 12749462 | 12749656 |
| chr3 | 12757335 | 12765268 | ARID3A | Hep-G2 | 12763369 | 12763545 |
| chr3 | 12749189 | 12754722 | ARID4B | PC-3 | 12750933 | 12751284 |
| chr3 | 12749189 | 12754722 | ARNT | SK-MEL-28 | 12750464 | 12750975 |
| chr3 | 12749189 | 12754722 | ARNT | MCF-7 | 12753618 | 12753924 |
| chr3 | 12757335 | 12765268 | ARNT | HCT-116,MCF-7 | 12759270 | 12759676 |
| chr3 | 12757335 | 12765268 | ARNT | MCF-7 | 12759316 | 12760463 |
| chr3 | 12757335 | 12765268 | ARNT | MCF-7,RCC4 | 12763398 | 12763674 |
| chr3 | 12749189 | 12754722 | ARNTL | U2OS | 12750212 | 12750782 |
| chr3 | 12749189 | 12754722 | ARNTL | U2OS | 12750321 | 12750857 |
| chr3 | 12749189 | 12754722 | ASCL1 | NCI-H889 | 12750378 | 12750487 |
| chr3 | 12757335 | 12765268 | ASCL1 | NCI-H82 | 12760612 | 12760728 |
| chr3 | 12749189 | 12754722 | ASH2L | GM12878 | 12749479 | 12749799 |
| chr3 | 12757335 | 12765268 | ATF2 | Hep-G2,HEK293,K-562 | 12763301 | 12763598 |
| chr3 | 12749189 | 12754722 | ATF3 | HCT-116 | 12750291 | 12750434 |
| chr3 | 12749189 | 12754722 | ATF3 | K-562,HCT-116 | 12750562 | 12750856 |
| chr3 | 12749189 | 12754722 | ATF3 | K-562,HCT-116 | 12751663 | 12751873 |
| chr3 | 12749189 | 12754722 | ATF3 | HCT-116 | 12753730 | 12753887 |
| chr3 | 12757335 | 12765268 | ATF3 | HCT-116 | 12759243 | 12759685 |
| chr3 | 12757335 | 12765268 | ATF3 | HCT-116 | 12759539 | 12759638 |
| chr3 | 12757335 | 12765268 | ATF3 | K-562,primary-dermal-fibroblasts,HCT-116,A-549,Hep-G2 | 12763338 | 12763632 |
| chr3 | 12749189 | 12754722 | ATF4 | K-562 | 12751614 | 12752311 |
| chr3 | 12749189 | 12754722 | ATF7 | GM12878 | 12750534 | 12750981 |
| chr3 | 12749189 | 12754722 | ATF7 | GM12878 | 12752814 | 12753323 |
| chr3 | 12757335 | 12765268 | ATF7 | K-562,MCF-7 | 12763276 | 12763636 |
| chr3 | 12749189 | 12754722 | BACH1 | SW1990,Hep-G2,WA01,AsPC-1,K-562,A-549 | 12750275 | 12750483 |
| chr3 | 12749189 | 12754722 | BACH1 | SW1990 | 12753671 | 12753956 |
| chr3 | 12757335 | 12765268 | BACH1 | Hep-G2 | 12763494 | 12763617 |
| chr3 | 12749189 | 12754722 | BACH2 | DOHH2,B-cell,OCI-Ly7 | 12750112 | 12750547 |
| chr3 | 12749189 | 12754722 | BACH2 | DOHH2,OCI-Ly7 | 12753595 | 12753954 |
| chr3 | 12749189 | 12754722 | BCL11A | GM12878 | 12749642 | 12749755 |
| chr3 | 12749189 | 12754722 | BCL11A | GM12878 | 12750712 | 12750846 |
| chr3 | 12749189 | 12754722 | BCL11A | GM12878 | 12752966 | 12753075 |
| chr3 | 12757335 | 12765268 | BCL11A | HUDEP-2 | 12763483 | 12763551 |
| chr3 | 12749189 | 12754722 | BCL3 | GM12878 | 12750661 | 12750818 |
| chr3 | 12757335 | 12765268 | BCL3 | A-549 | 12763305 | 12763653 |
| chr3 | 12749189 | 12754722 | BCL6 | SU-DHL-4,B-cell,OCI-Ly7,OCI-Ly1 | 12749423 | 12749781 |
| chr3 | 12749189 | 12754722 | BCL6 | OCI-Ly1 | 12750265 | 12750438 |
| chr3 | 12757335 | 12765268 | BCLAF1 | K-562 | 12763345 | 12763557 |
| chr3 | 12749189 | 12754722 | BCOR | B-cell | 12749366 | 12749852 |
| chr3 | 12749189 | 12754722 | BCOR | B-cell | 12750356 | 12750512 |
| chr3 | 12757335 | 12765268 | BCOR | B-cell | 12757539 | 12757675 |
| chr3 | 12757335 | 12765268 | BCOR | WA01 | 12758078 | 12758265 |
| chr3 | 12757335 | 12765268 | BCOR | K-562 | 12764167 | 12764852 |
| chr3 | 12757335 | 12765268 | BRCA1 | SH-EP | 12763454 | 12763593 |
| chr3 | 12757335 | 12765268 | BRD1 | RKO | 12763495 | 12763614 |
| chr3 | 12749189 | 12754722 | CBFA2T3 | U-937 | 12750653 | 12751023 |
| chr3 | 12757335 | 12765268 | CBFA2T3 | K-562 | 12763393 | 12763609 |
| chr3 | 12749189 | 12754722 | CBFB | GM12878 | 12749584 | 12749747 |
| chr3 | 12749189 | 12754722 | CBFB | SaOS-2 | 12750558 | 12750882 |
| chr3 | 12749189 | 12754722 | CBX3 | HCT-116 | 12750313 | 12750495 |
| chr3 | 12749189 | 12754722 | CBX3 | HCT-116 | 12753723 | 12753841 |
| chr3 | 12749189 | 12754722 | CEBPA | MV4-11 | 12750595 | 12750910 |
| chr3 | 12757335 | 12765268 | CEBPA | SKH1 | 12759870 | 12759997 |
| chr3 | 12757335 | 12765268 | CEBPA | MV4-11 | 12763333 | 12763535 |
| chr3 | 12749189 | 12754722 | CEBPB | MV4-11 | 12750562 | 12751012 |
| chr3 | 12749189 | 12754722 | CEBPB | HFOB | 12750639 | 12751119 |
| chr3 | 12749189 | 12754722 | CEBPB | MCF-7 | 12753777 | 12753892 |
| chr3 | 12757335 | 12765268 | CEBPB | Ishikawa | 12758097 | 12758235 |
| chr3 | 12757335 | 12765268 | CEBPB | MCF-7,A-549,Ishikawa,Hep-G2 | 12763450 | 12763576 |
| chr3 | 12749189 | 12754722 | CEBPD | Hep-G2 | 12753577 | 12753719 |
| chr3 | 12749189 | 12754722 | CHD1 | HeLa-S3 | 12753681 | 12753873 |
| chr3 | 12757335 | 12765268 | CHD2 | HeLa-S3 | 12763410 | 12763624 |
| chr3 | 12749189 | 12754722 | CHD4 | SCC-9 | 12750456 | 12750926 |
| chr3 | 12749189 | 12754722 | CHD4 | SCMC | 12751735 | 12751964 |
| chr3 | 12749189 | 12754722 | CHD4 | keratinocyte | 12753790 | 12753976 |
| chr3 | 12757335 | 12765268 | CHD4 | keratinocyte | 12759598 | 12759844 |
| chr3 | 12757335 | 12765268 | CHD4 | SCMC | 12760516 | 12760861 |
| chr3 | 12757335 | 12765268 | CHD4 | HaCaT,SCMC,keratinocyte,RH5 | 12763320 | 12763621 |
| chr3 | 12757335 | 12765268 | CHD4 | keratinocyte,A-549 | 12764224 | 12764604 |
| chr3 | 12757335 | 12765268 | CHD7 | hiPSC | 12763371 | 12763657 |
| chr3 | 12757335 | 12765268 | CHD8 | T-47D | 12759228 | 12759450 |
| chr3 | 12749189 | 12754722 | CREB1 | GM12878 | 12749581 | 12749701 |
| chr3 | 12749189 | 12754722 | CREB1 | A-549,LNCaP-abl | 12750323 | 12750552 |
| chr3 | 12749189 | 12754722 | CREB1 | MCF-7 | 12752827 | 12753033 |
| chr3 | 12757335 | 12765268 | CREB1 | MCF-7,A-549,Hep-G2 | 12759166 | 12759450 |
| chr3 | 12757335 | 12765268 | CREB1 | MCF-7,A-549,WA01 | 12763392 | 12763636 |
| chr3 | 12749189 | 12754722 | CREBBP | tonsil | 12749380 | 12749820 |
| chr3 | 12749189 | 12754722 | CREBBP | PC-3 | 12749974 | 12750101 |
| chr3 | 12749189 | 12754722 | CREBBP | PC-3 | 12750430 | 12750549 |
| chr3 | 12749189 | 12754722 | CREBBP | keratinocyte | 12751596 | 12751976 |
| chr3 | 12749189 | 12754722 | CREBBP | MCF-7,PC-3,keratinocyte | 12753585 | 12753860 |
| chr3 | 12757335 | 12765268 | CREBBP | PC-3 | 12758453 | 12758863 |
| chr3 | 12757335 | 12765268 | CREBBP | PC-3 | 12759046 | 12759235 |
| chr3 | 12757335 | 12765268 | CREBBP | PC-3,MCF-7,keratinocyte | 12759225 | 12759997 |
| chr3 | 12757335 | 12765268 | CREBBP | NCI-H3396 | 12759626 | 12759715 |
| chr3 | 12757335 | 12765268 | CREBBP | MCF-7,PC-3 | 12759710 | 12760122 |
| chr3 | 12757335 | 12765268 | CREBBP | PC-3 | 12760188 | 12760316 |
| chr3 | 12757335 | 12765268 | CREBBP | MCF-7,fibroblast,keratinocyte | 12763341 | 12763721 |
| chr3 | 12757335 | 12765268 | CREBBP | LS180 | 12764605 | 12764686 |
| chr3 | 12749189 | 12754722 | CREM | GM12878 | 12749581 | 12749758 |
| chr3 | 12757335 | 12765268 | CREM | K-562 | 12763461 | 12763565 |
| chr3 | 12749189 | 12754722 | CRY1 | U2OS | 12749931 | 12750295 |
| chr3 | 12749189 | 12754722 | CRY1 | U2OS | 12750274 | 12750833 |
| chr3 | 12757335 | 12765268 | CRY1 | U2OS | 12760095 | 12760380 |
| chr3 | 12757335 | 12765268 | CSDC2 | SK-N-SH | 12763347 | 12763747 |
| chr3 | 12749189 | 12754722 | CTBP1 | K-562 | 12750228 | 12750531 |
| chr3 | 12749189 | 12754722 | CTBP1 | MCF-7 | 12753682 | 12753949 |
| chr3 | 12757335 | 12765268 | CTBP1 | MCF-7 | 12759220 | 12759574 |
| chr3 | 12757335 | 12765268 | CTBP1 | MCF-7 | 12759851 | 12760617 |
| chr3 | 12757335 | 12765268 | CTBP1 | MCF-7,K-562 | 12763292 | 12763706 |
| chr3 | 12749189 | 12754722 | CTCF | keratinocyte,SUM159,esophagus | 12750312 | 12750442 |
| chr3 | 12749189 | 12754722 | CTCF | esophagus | 12753602 | 12753840 |
| chr3 | 12749189 | 12754722 | CTCF | erythroid | 12753702 | 12753932 |
| chr3 | 12757335 | 12765268 | CTCF | keratinocyte,esophagus,GM04604 | 12757536 | 12757796 |
| chr3 | 12757335 | 12765268 | CTCF | uterus,myoblast,thoracic-aorta,choroid-plexus,SLK,lung,aorta,fibroblast,primary-glioblastoma,GM04648,HAP1,HeLa-Kyoto,HeLa,gastroesophageal-sphincter,spleen,thyroid-gland,GM04025,THP-1,keratinocyte,astrocyte,GM04604,FT282,esophagus-muscularis-mucosa,heart,SK-N-SH,primary-epidermal-keratinocyte,HEC-1-B,tibial-nerve,GM06077,esophagus,prostate,ascending-aorta,nerve,stomach,HCT-116 | 12758020 | 12758261 |
| chr3 | 12757335 | 12765268 | CTCF | SUM159 | 12758672 | 12758766 |
| chr3 | 12757335 | 12765268 | CTCF | T-47D,HeLa-S3,GSC23 | 12759256 | 12759587 |
| chr3 | 12757335 | 12765268 | CTCF | ID00016 | 12760622 | 12760861 |
| chr3 | 12757335 | 12765268 | CTCF | heart,hiPSC,choroid-plexus,RH4,SUM159 | 12763401 | 12763592 |
| chr3 | 12757335 | 12765268 | DACH1 | K-562 | 12763412 | 12763680 |
| chr3 | 12749189 | 12754722 | DAXX | PC-3 | 12750293 | 12750464 |
| chr3 | 12749189 | 12754722 | DAXX | PC-3 | 12753698 | 12753877 |
| chr3 | 12757335 | 12765268 | DAXX | PC-3 | 12763306 | 12763616 |
| chr3 | 12749189 | 12754722 | DDX5 | NTERA2 | 12752436 | 12752755 |
| chr3 | 12757335 | 12765268 | DDX5 | NTERA2 | 12760693 | 12761016 |
| chr3 | 12757335 | 12765268 | DEK | HeLa-S3 | 12763417 | 12763582 |
| chr3 | 12749189 | 12754722 | DIDO1 | K-562 | 12750634 | 12751022 |
| chr3 | 12749189 | 12754722 | DPF2 | GM12878 | 12749352 | 12749811 |
| chr3 | 12749189 | 12754722 | DPF2 | GM12878 | 12750644 | 12750860 |
| chr3 | 12749189 | 12754722 | DPF2 | MCF-7 | 12753554 | 12753976 |
| chr3 | 12749189 | 12754722 | DPF2 | K-562 | 12754367 | 12754661 |
| chr3 | 12757335 | 12765268 | DPF2 | MCF-7 | 12759229 | 12760357 |
| chr3 | 12757335 | 12765268 | DPF2 | BIN-67,MCF-7,K-562 | 12763289 | 12763685 |
| chr3 | 12757335 | 12765268 | DRAP1 | Hep-G2 | 12759281 | 12759422 |
| chr3 | 12757335 | 12765268 | E2F1 | MDA-MB-231,U-87MG | 12763426 | 12763738 |
| chr3 | 12749189 | 12754722 | E2F6 | A-549,K-562 | 12750348 | 12750520 |
| chr3 | 12757335 | 12765268 | EED | ProEs | 12758553 | 12758706 |
| chr3 | 12757335 | 12765268 | EGR1 | Hep-G2,HCT-116 | 12759408 | 12759645 |
| chr3 | 12757335 | 12765268 | EGR1 | K-562,Hep-G2,fibroblast | 12763404 | 12763671 |
| chr3 | 12749189 | 12754722 | EHF | A-549 | 12750263 | 12750551 |
| chr3 | 12749189 | 12754722 | EHF | RWPE-1 | 12753640 | 12753941 |
| chr3 | 12757335 | 12765268 | EHF | RWPE-1 | 12758618 | 12758888 |
| chr3 | 12757335 | 12765268 | EHF | RWPE-1 | 12759076 | 12759701 |
| chr3 | 12757335 | 12765268 | EHF | RWPE-1 | 12763324 | 12763749 |
| chr3 | 12749189 | 12754722 | EHMT2 | K-562 | 12750175 | 12750376 |
| chr3 | 12749189 | 12754722 | EHMT2 | K-562 | 12751882 | 12752218 |
| chr3 | 12749189 | 12754722 | ELF1 | GM12878 | 12749496 | 12749749 |
| chr3 | 12749189 | 12754722 | ELF1 | K-562,SK-N-MC,A-549 | 12750375 | 12750598 |
| chr3 | 12749189 | 12754722 | ELF1 | MCF-7 | 12753682 | 12753925 |
| chr3 | 12757335 | 12765268 | ELF1 | Hep-G2,MCF-7 | 12759241 | 12759624 |
| chr3 | 12757335 | 12765268 | ELF1 | MCF-7 | 12760100 | 12760245 |
| chr3 | 12757335 | 12765268 | ELF1 | MCF-7,A-549 | 12763439 | 12763636 |
| chr3 | 12749189 | 12754722 | ELL2 | HeLa | 12750335 | 12750518 |
| chr3 | 12757335 | 12765268 | ELL2 | HeLa | 12759195 | 12759520 |
| chr3 | 12757335 | 12765268 | ELL2 | HeLa | 12763410 | 12763672 |
| chr3 | 12749189 | 12754722 | EP300 | AML | 12749618 | 12749711 |
| chr3 | 12749189 | 12754722 | EP300 | HeLa-S3,T-47D,SK-N-SH | 12750278 | 12750449 |
| chr3 | 12749189 | 12754722 | EP300 | fibroblast,AML | 12750610 | 12750796 |
| chr3 | 12749189 | 12754722 | EP300 | HeLa-S3,T-47D | 12751654 | 12751863 |
| chr3 | 12749189 | 12754722 | EP300 | PC-3 | 12753552 | 12753700 |
| chr3 | 12749189 | 12754722 | EP300 | T-47D,MCF-7 | 12753709 | 12753912 |
| chr3 | 12757335 | 12765268 | EP300 | MCF-7,T-47D,PC-3 | 12759333 | 12759800 |
| chr3 | 12757335 | 12765268 | EP300 | T-47D | 12760029 | 12760187 |
| chr3 | 12757335 | 12765268 | EP300 | PC-3 | 12760164 | 12760315 |
| chr3 | 12757335 | 12765268 | EP300 | SK-N-SH,A-549,MCF-7,Ishikawa | 12763389 | 12763673 |
| chr3 | 12749189 | 12754722 | EPAS1 | ccRCC | 12750310 | 12750856 |
| chr3 | 12757335 | 12765268 | EPAS1 | PC-3 | 12763376 | 12763634 |
| chr3 | 12749189 | 12754722 | ERG | VCaP | 12753706 | 12753881 |
| chr3 | 12757335 | 12765268 | ERG | SKNO-1,aortic-endothelial-cell,MCF-7 | 12758594 | 12758796 |
| chr3 | 12757335 | 12765268 | ERG | SKNO-1,K-562,RWPE-1 | 12759249 | 12759547 |
| chr3 | 12757335 | 12765268 | ERG | aortic-endothelial-cell,RWPE-1 | 12763236 | 12763449 |
| chr3 | 12749189 | 12754722 | ESR1 | primary-breast-cancer,MCF-7,T-47D,Ishikawa | 12750226 | 12750520 |
| chr3 | 12749189 | 12754722 | ESR1 | T-47D,MCF-7,U2OS | 12750750 | 12751054 |
| chr3 | 12749189 | 12754722 | ESR1 | MCF-7,T-47D | 12751622 | 12751796 |
| chr3 | 12749189 | 12754722 | ESR1 | MCF-7,U2OS | 12751808 | 12752024 |
| chr3 | 12749189 | 12754722 | ESR1 | primary-breast-cancer | 12752833 | 12753082 |
| chr3 | 12749189 | 12754722 | ESR1 | MCF-7 | 12753028 | 12753148 |
| chr3 | 12749189 | 12754722 | ESR1 | MCF-7,T-47D,Ishikawa | 12753698 | 12753963 |
| chr3 | 12757335 | 12765268 | ESR1 | primary-breast-cancer,T-47D,Ishikawa | 12758515 | 12758778 |
| chr3 | 12757335 | 12765268 | ESR1 | primary-breast-cancer,MCF-7,SUM44PE,breast,T-47D,Ishikawa | 12759281 | 12759630 |
| chr3 | 12757335 | 12765268 | ESR1 | primary-breast-cancer,MCF-7,breast,T-47D,T-47D-B,Ishikawa | 12759915 | 12760272 |
| chr3 | 12757335 | 12765268 | ESR1 | MCF-7 | 12761129 | 12761223 |
| chr3 | 12757335 | 12765268 | ESR1 | primary-breast-cancer,MCF-7,breast,T-47D,Ishikawa | 12763376 | 12763630 |
| chr3 | 12749189 | 12754722 | ESRRA | SK-BR-3 | 12751688 | 12751902 |
| chr3 | 12749189 | 12754722 | ESRRA | SK-BR-3 | 12753719 | 12753979 |
| chr3 | 12757335 | 12765268 | ESRRA | SK-BR-3 | 12759335 | 12759742 |
| chr3 | 12757335 | 12765268 | ESRRA | SK-BR-3,MCF-7 | 12759744 | 12760394 |
| chr3 | 12757335 | 12765268 | ESRRA | BT-474,A-549,K-562,SK-BR-3,MCF-7 | 12763301 | 12763718 |
| chr3 | 12757335 | 12765268 | ESRRA | BT-474,A-549,K-562,SK-BR-3,MCF-7 | 12764152 | 12764678 |
| chr3 | 12757335 | 12765268 | ESRRG | cardiomyocyte | 12763341 | 12763642 |
| chr3 | 12757335 | 12765268 | ESRRG | BT-474 | 12764264 | 12764522 |
| chr3 | 12749189 | 12754722 | ETS1 | 786-O | 12750296 | 12750581 |
| chr3 | 12749189 | 12754722 | ETS1 | SCC-25 | 12753674 | 12753901 |
| chr3 | 12757335 | 12765268 | ETS1 | HUVEC-C | 12758336 | 12758634 |
| chr3 | 12757335 | 12765268 | ETS1 | SCC-25 | 12759243 | 12759835 |
| chr3 | 12757335 | 12765268 | ETS1 | SCC-25,786-O,K-562,Hep-G2,A-549 | 12763405 | 12763630 |
| chr3 | 12757335 | 12765268 | ETS1 | HUVEC-C | 12763615 | 12763846 |
| chr3 | 12757335 | 12765268 | ETV1 | LNCaP | 12759311 | 12759403 |
| chr3 | 12757335 | 12765268 | ETV4 | T-47D | 12759256 | 12759739 |
| chr3 | 12757335 | 12765268 | ETV4 | T-47D | 12759845 | 12760143 |
| chr3 | 12749189 | 12754722 | EZH2 | WSU-DLCL2 | 12749592 | 12749852 |
| chr3 | 12757335 | 12765268 | EZH2 | RH30 | 12763262 | 12763640 |
| chr3 | 12749189 | 12754722 | FLI1 | SEM | 12749587 | 12749725 |
| chr3 | 12757335 | 12765268 | FLI1 | SKNO-1 | 12758369 | 12758667 |
| chr3 | 12757335 | 12765268 | FLI1 | SKNO-1 | 12759274 | 12759535 |
| chr3 | 12757335 | 12765268 | FLI1 | SEM | 12763299 | 12763486 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116 | 12749345 | 12749814 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116 | 12749867 | 12750146 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116 | 12750342 | 12751135 |
| chr3 | 12749189 | 12754722 | FOS | leiomyoma,IMR-90 | 12750686 | 12750829 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116 | 12751629 | 12752539 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116 | 12752724 | 12753140 |
| chr3 | 12749189 | 12754722 | FOS | HCT-116,MCF-7,MCF-10A | 12753568 | 12753923 |
| chr3 | 12757335 | 12765268 | FOS | myometrium | 12758096 | 12758169 |
| chr3 | 12757335 | 12765268 | FOS | K-562,MCF-7,MCF-10A | 12759264 | 12759646 |
| chr3 | 12757335 | 12765268 | FOS | HCT-116 | 12761016 | 12761226 |
| chr3 | 12757335 | 12765268 | FOS | CFPAC-1,myometrium,MCF-10A,leiomyoma,HeLa-S3,endothelial,K-562,MCF-7,IMR-90,Hep-G2 | 12763393 | 12763657 |
| chr3 | 12749189 | 12754722 | FOSL1 | BT-549 | 12750243 | 12750468 |
| chr3 | 12749189 | 12754722 | FOSL1 | MDA-MB-231,K-562,BT-549 | 12750586 | 12750933 |
| chr3 | 12749189 | 12754722 | FOSL1 | HCT-116 | 12753696 | 12753888 |
| chr3 | 12757335 | 12765268 | FOSL1 | MDA-MB-231,BT-549,K-562,143B,HCT-116,MNNG-HOS | 12763329 | 12763675 |
| chr3 | 12749189 | 12754722 | FOSL2 | NPC,SK-N-SH | 12750272 | 12750508 |
| chr3 | 12749189 | 12754722 | FOSL2 | hESC,LPS141,SK-N-SH | 12750650 | 12750884 |
| chr3 | 12749189 | 12754722 | FOSL2 | LPS141 | 12751673 | 12751887 |
| chr3 | 12749189 | 12754722 | FOSL2 | MCF-7 | 12753673 | 12753898 |
| chr3 | 12757335 | 12765268 | FOSL2 | A-549,Hep-G2,MDA-MB-231,NPC,hESC,LPS141,SK-N-SH,MCF-7 | 12763337 | 12763692 |
| chr3 | 12749189 | 12754722 | FOXA1 | primary-breast-cancer | 12749670 | 12749849 |
| chr3 | 12749189 | 12754722 | FOXA1 | T-47D,MCF-7,primary-breast-cancer | 12752875 | 12753128 |
| chr3 | 12749189 | 12754722 | FOXA1 | T-47D,MCF-7 | 12753706 | 12753933 |
| chr3 | 12757335 | 12765268 | FOXA1 | LNCaP,primary-breast-cancer | 12758168 | 12758400 |
| chr3 | 12757335 | 12765268 | FOXA1 | breast | 12758386 | 12758582 |
| chr3 | 12757335 | 12765268 | FOXA1 | T-47D,MCF-7-TAMR-1,MCF-7,primary-breast-cancer | 12759161 | 12759461 |
| chr3 | 12757335 | 12765268 | FOXA1 | T-47D,pancreatic-progenitor,LNCaP,breast,MCF-7,primary-breast-cancer,breast-cancer | 12760003 | 12760298 |
| chr3 | 12757335 | 12765268 | FOXA1 | T-47D,MCF-7,primary-breast-cancer,breast,A-549,MCF-7-TAMR-1 | 12763428 | 12763647 |
| chr3 | 12757335 | 12765268 | FOXA2 | pancreatic-progenitor | 12760071 | 12760359 |
| chr3 | 12757335 | 12765268 | FOXA2 | BJ1-hTERT,PANC-1 | 12763341 | 12763742 |
| chr3 | 12749189 | 12754722 | FOXL2 | HGrC1 | 12750346 | 12750512 |
| chr3 | 12749189 | 12754722 | FOXL2 | HGrC1,KGN | 12750519 | 12751021 |
| chr3 | 12749189 | 12754722 | FOXL2 | HGrC1 | 12751623 | 12751900 |
| chr3 | 12757335 | 12765268 | FOXL2 | KGN | 12758080 | 12758320 |
| chr3 | 12757335 | 12765268 | FOXL2 | HGrC1,KGN | 12760495 | 12760800 |
| chr3 | 12757335 | 12765268 | FOXL2 | HGrC1 | 12763377 | 12763551 |
| chr3 | 12749189 | 12754722 | GABPA | VCaP | 12749622 | 12749756 |
| chr3 | 12749189 | 12754722 | GABPA | MCF-7 | 12753725 | 12753910 |
| chr3 | 12757335 | 12765268 | GABPA | MCF-7 | 12759249 | 12759430 |
| chr3 | 12757335 | 12765268 | GABPA | MCF-7,A-549 | 12763348 | 12763614 |
| chr3 | 12749189 | 12754722 | GATA2 | SKH1 | 12749458 | 12749862 |
| chr3 | 12749189 | 12754722 | GATA2 | primary-endometrial-stromal-cell | 12750232 | 12750546 |
| chr3 | 12749189 | 12754722 | GATA2 | ESF,primary-endometrial-stromal-cell | 12750703 | 12751019 |
| chr3 | 12757335 | 12765268 | GATA2 | hiPSC | 12759379 | 12759585 |
| chr3 | 12749189 | 12754722 | GATA3 | T-47D | 12750212 | 12750451 |
| chr3 | 12749189 | 12754722 | GATA3 | T-47D | 12751576 | 12751892 |
| chr3 | 12749189 | 12754722 | GATA3 | T-47D | 12753713 | 12753869 |
| chr3 | 12757335 | 12765268 | GATA3 | MCF-7,T-47D | 12759971 | 12760234 |
| chr3 | 12757335 | 12765268 | GATA3 | A-549,MCF-7 | 12763376 | 12763652 |
| chr3 | 12757335 | 12765268 | GATA6 | YCC-3,OACP4-C | 12759213 | 12759523 |
| chr3 | 12757335 | 12765268 | GATA6 | AGS | 12761678 | 12761757 |
| chr3 | 12757335 | 12765268 | GATAD1 | HeLa | 12763393 | 12763621 |
| chr3 | 12749189 | 12754722 | GATAD2B | GM12878 | 12749469 | 12749758 |
| chr3 | 12757335 | 12765268 | GATAD2B | MCF-7,GM12878 | 12759912 | 12760194 |
| chr3 | 12749189 | 12754722 | GFI1B | K-562,SET-2 | 12749476 | 12749787 |
| chr3 | 12749189 | 12754722 | GFI1B | K-562 | 12750308 | 12750592 |
| chr3 | 12757335 | 12765268 | GFI1B | K-562 | 12763347 | 12763581 |
| chr3 | 12749189 | 12754722 | GFI1 | NB4,THP-1 | 12749466 | 12749834 |
| chr3 | 12757335 | 12765268 | GLIS1 | HEK293 | 12763230 | 12763754 |
| chr3 | 12757335 | 12765268 | GLIS2 | HEK293 | 12758457 | 12758757 |
| chr3 | 12757335 | 12765268 | GLIS2 | HEK293 | 12759207 | 12759748 |
| chr3 | 12757335 | 12765268 | GLIS2 | HEK293,HCT-116 | 12763311 | 12763688 |
| chr3 | 12757335 | 12765268 | GLIS3 | H9 | 12763265 | 12763793 |
| chr3 | 12749189 | 12754722 | GRHL1 | MCF-7 | 12753674 | 12753990 |
| chr3 | 12757335 | 12765268 | GRHL1 | MCF-7 | 12759367 | 12759588 |
| chr3 | 12757335 | 12765268 | GRHL1 | MCF-7 | 12759901 | 12760369 |
| chr3 | 12749189 | 12754722 | GTF2B | HeLa | 12750262 | 12750435 |
| chr3 | 12757335 | 12765268 | GTF2F1 | HeLa-S3,MCF-7 | 12763392 | 12763629 |
| chr3 | 12749189 | 12754722 | GTF3C2 | T98G | 12750109 | 12750759 |
| chr3 | 12749189 | 12754722 | HDAC1 | K-562 | 12750305 | 12750574 |
| chr3 | 12749189 | 12754722 | HDAC1 | PC-3 | 12753518 | 12753699 |
| chr3 | 12749189 | 12754722 | HDAC1 | MCF-7 | 12753617 | 12753962 |
| chr3 | 12757335 | 12765268 | HDAC1 | MCF-7,PC-3 | 12759299 | 12759786 |
| chr3 | 12757335 | 12765268 | HDAC1 | PC-3 | 12759730 | 12760036 |
| chr3 | 12757335 | 12765268 | HDAC1 | K-562,MCF-7 | 12763360 | 12763684 |
| chr3 | 12749189 | 12754722 | HDAC2 | K-562 | 12750169 | 12750557 |
| chr3 | 12749189 | 12754722 | HDAC2 | PC-3 | 12750436 | 12750584 |
| chr3 | 12749189 | 12754722 | HDAC2 | RH4,PC-3 | 12750671 | 12750852 |
| chr3 | 12749189 | 12754722 | HDAC2 | K-562 | 12751775 | 12751867 |
| chr3 | 12749189 | 12754722 | HDAC2 | K-562 | 12751877 | 12752145 |
| chr3 | 12749189 | 12754722 | HDAC2 | PC-3 | 12753512 | 12753672 |
| chr3 | 12749189 | 12754722 | HDAC2 | MCF-7 | 12753672 | 12753914 |
| chr3 | 12749189 | 12754722 | HDAC2 | PC-3 | 12753875 | 12754065 |
| chr3 | 12757335 | 12765268 | HDAC2 | PC-3 | 12758223 | 12758346 |
| chr3 | 12757335 | 12765268 | HDAC2 | PC-3 | 12758468 | 12758763 |
| chr3 | 12757335 | 12765268 | HDAC2 | PC-3 | 12759435 | 12760060 |
| chr3 | 12757335 | 12765268 | HDAC2 | MCF-7 | 12760016 | 12760309 |
| chr3 | 12757335 | 12765268 | HDAC2 | PC-3 | 12760188 | 12760586 |
| chr3 | 12757335 | 12765268 | HDAC2 | RH4,MCF-7 | 12763299 | 12763708 |
| chr3 | 12757335 | 12765268 | HDAC2 | K-562 | 12764228 | 12764576 |
| chr3 | 12757335 | 12765268 | HDAC2 | RH4,A-549 | 12764376 | 12764795 |
| chr3 | 12757335 | 12765268 | HDAC3 | RH4 | 12763259 | 12763770 |
| chr3 | 12757335 | 12765268 | HDAC8 | K-562 | 12759020 | 12759475 |
| chr3 | 12749189 | 12754722 | HIF1A | U2OS | 12749538 | 12749746 |
| chr3 | 12749189 | 12754722 | HIF1A | BEAS-2B,PC-3,U2OS,RCC10 | 12750295 | 12750658 |
| chr3 | 12749189 | 12754722 | HIF1A | MDA-MB-231 | 12750530 | 12750829 |
| chr3 | 12749189 | 12754722 | HIF1A | PC-3,U2OS | 12751684 | 12752006 |
| chr3 | 12757335 | 12765268 | HIF1A | BEAS-2B | 12759204 | 12759639 |
| chr3 | 12757335 | 12765268 | HIF1A | PC-3,U2OS | 12763381 | 12763658 |
| chr3 | 12749189 | 12754722 | HIF3A | Hep-3B2-1-7 | 12751680 | 12752058 |
| chr3 | 12757335 | 12765268 | HIF3A | Hep-3B2-1-7 | 12759102 | 12759965 |
| chr3 | 12757335 | 12765268 | HIF3A | Hep-3B2-1-7 | 12763205 | 12763725 |
| chr3 | 12757335 | 12765268 | HIVEP1 | Hep-G2 | 12759409 | 12759829 |
| chr3 | 12749189 | 12754722 | HMBOX1 | K-562 | 12752358 | 12752506 |
| chr3 | 12749189 | 12754722 | HNF4A | Hep-G2 | 12751951 | 12752349 |
| chr3 | 12757335 | 12765268 | HNF4A | gastric-epithelial-cell,IM95 | 12763312 | 12763614 |
| chr3 | 12749189 | 12754722 | HOXB13 | A-549 | 12750283 | 12750827 |
| chr3 | 12749189 | 12754722 | HOXB5 | A-549 | 12750261 | 12750615 |
| chr3 | 12749189 | 12754722 | HSF1 | U2OS | 12750885 | 12751005 |
| chr3 | 12757335 | 12765268 | HSF1 | NCI-H838 | 12763448 | 12763695 |
| chr3 | 12757335 | 12765268 | ID3 | K-562 | 12764290 | 12764719 |
| chr3 | 12757335 | 12765268 | INSM2 | HEK293 | 12763360 | 12763749 |
| chr3 | 12757335 | 12765268 | IRF1 | HAEC | 12760371 | 12760502 |
| chr3 | 12757335 | 12765268 | IRF2 | keratinocyte | 12758118 | 12758482 |
| chr3 | 12757335 | 12765268 | IRF2 | keratinocyte | 12759294 | 12759963 |
| chr3 | 12757335 | 12765268 | IRF2 | keratinocyte | 12763286 | 12763808 |
| chr3 | 12749189 | 12754722 | IRF4 | GM12878 | 12749531 | 12749740 |
| chr3 | 12749189 | 12754722 | IRF4 | T-cell | 12750236 | 12750474 |
| chr3 | 12749189 | 12754722 | IRF4 | B-cell,T-cell,GM12878 | 12750614 | 12750909 |
| chr3 | 12749189 | 12754722 | JMJD1C | HL-60 | 12749546 | 12749737 |
| chr3 | 12749189 | 12754722 | JMJD1C | HL-60 | 12750387 | 12751060 |
| chr3 | 12749189 | 12754722 | JUNB | GM12878 | 12749565 | 12749754 |
| chr3 | 12749189 | 12754722 | JUNB | MCF10A-Er-Src,K-562,CD4 | 12750572 | 12750831 |
| chr3 | 12757335 | 12765268 | JUNB | keratinocyte | 12759292 | 12759709 |
| chr3 | 12757335 | 12765268 | JUNB | CFPAC-1,MCF10A-Er-Src,HAEC,MCF-7,K-562,keratinocyte | 12763340 | 12763692 |
| chr3 | 12757335 | 12765268 | JUNB | K-562 | 12764567 | 12764706 |
| chr3 | 12749189 | 12754722 | JUND | Hep-G2,K-562,SK-N-SH | 12750294 | 12750483 |
| chr3 | 12749189 | 12754722 | JUND | K-562,SK-N-SH | 12750696 | 12750862 |
| chr3 | 12749189 | 12754722 | JUND | MCF-7,HCT-116 | 12753690 | 12753894 |
| chr3 | 12757335 | 12765268 | JUND | GP5D | 12759312 | 12759607 |
| chr3 | 12757335 | 12765268 | JUND | GP5D | 12759842 | 12760136 |
| chr3 | 12757335 | 12765268 | JUND | MCF-7,HCT-116,A-549,Hep-G2,K-562,WA01,SK-N-SH,HeLa-S3 | 12763372 | 12763629 |
| chr3 | 12749189 | 12754722 | JUN | MDA-BoM-1833 | 12750282 | 12750512 |
| chr3 | 12749189 | 12754722 | JUN | MDA-MB-231,Karpas-299,786-O,BT-549,K-562,T-cell,MDA-BoM-1833 | 12750561 | 12750922 |
| chr3 | 12749189 | 12754722 | JUN | HeLa-S3 | 12751643 | 12751795 |
| chr3 | 12749189 | 12754722 | JUN | 786-O | 12752841 | 12753178 |
| chr3 | 12749189 | 12754722 | JUN | MCF-7,MDA-BoM-1833 | 12753651 | 12753932 |
| chr3 | 12757335 | 12765268 | JUN | MDA-BoM-1833 | 12758453 | 12758766 |
| chr3 | 12757335 | 12765268 | JUN | MDA-MB-231,MCF-7,MCF10A-Er-Src,MDA-BoM-1833 | 12759267 | 12759646 |
| chr3 | 12757335 | 12765268 | JUN | MCF-7,HAEC,HeLa-S3,keratinocyte,endothelial,MDA-MB-231,Hep-G2,MCF10A-Er-Src,A-549,K-562,HUES-8,786-O,MDA-BoM-1833 | 12763339 | 12763663 |
| chr3 | 12757335 | 12765268 | KLF13 | K-562 | 12764371 | 12764752 |
| chr3 | 12749189 | 12754722 | KLF3 | keratinocyte | 12753583 | 12753997 |
| chr3 | 12757335 | 12765268 | KLF3 | keratinocyte | 12757815 | 12758174 |
| chr3 | 12757335 | 12765268 | KLF3 | keratinocyte | 12758478 | 12758753 |
| chr3 | 12757335 | 12765268 | KLF3 | keratinocyte | 12758995 | 12760337 |
| chr3 | 12757335 | 12765268 | KLF3 | keratinocyte | 12763215 | 12763540 |
| chr3 | 12749189 | 12754722 | KLF4 | keratinocyte | 12753697 | 12753917 |
| chr3 | 12757335 | 12765268 | KLF4 | HAP1 | 12757944 | 12758159 |
| chr3 | 12757335 | 12765268 | KLF4 | keratinocyte | 12759284 | 12759747 |
| chr3 | 12757335 | 12765268 | KLF4 | keratinocyte,foreskin | 12763292 | 12763548 |
| chr3 | 12757335 | 12765268 | KLF5 | HEK293 | 12758147 | 12758354 |
| chr3 | 12757335 | 12765268 | KLF5 | ESO-26,HCC95 | 12759201 | 12759614 |
| chr3 | 12757335 | 12765268 | KLF6 | Hep-G2 | 12763561 | 12763676 |
| chr3 | 12757335 | 12765268 | KLF9 | GBM1A | 12758655 | 12758774 |
| chr3 | 12749189 | 12754722 | L3MBTL2 | K-562 | 12750169 | 12750905 |
| chr3 | 12749189 | 12754722 | L3MBTL2 | K-562 | 12751608 | 12752004 |
| chr3 | 12749189 | 12754722 | LMO1 | Jurkat | 12750405 | 12750694 |
| chr3 | 12749189 | 12754722 | MAFB | islet | 12750250 | 12750535 |
| chr3 | 12749189 | 12754722 | MAFF | K-562,HeLa-S3 | 12750256 | 12750466 |
| chr3 | 12749189 | 12754722 | MAFF | K-562,GM12878,HeLa-S3 | 12752860 | 12753174 |
| chr3 | 12757335 | 12765268 | MAFF | HeLa-S3 | 12763409 | 12763715 |
| chr3 | 12749189 | 12754722 | MAFG | K-562 | 12750109 | 12750605 |
| chr3 | 12749189 | 12754722 | MAFG | K-562 | 12752685 | 12753217 |
| chr3 | 12749189 | 12754722 | MAF | keratinocyte | 12752927 | 12753099 |
| chr3 | 12757335 | 12765268 | MAF | keratinocyte | 12759370 | 12759565 |
| chr3 | 12749189 | 12754722 | MAFK | OCI-Ly7,K-562,Hep-G2,WA01,HeLa-S3 | 12750246 | 12750461 |
| chr3 | 12749189 | 12754722 | MAFK | OCI-Ly7,HeLa-S3,GM12878,K-562,Hep-G2,WA01,MCF-7 | 12752837 | 12753161 |
| chr3 | 12757335 | 12765268 | MAFK | HeLa-S3,MCF-7,Hep-G2,K-562 | 12763410 | 12763704 |
| chr3 | 12749189 | 12754722 | MAML1 | SCC | 12750641 | 12750847 |
| chr3 | 12749189 | 12754722 | MAML1 | SCC | 12751563 | 12751912 |
| chr3 | 12749189 | 12754722 | MAML1 | SCC | 12753687 | 12753978 |
| chr3 | 12757335 | 12765268 | MAML1 | SCC | 12759204 | 12760240 |
| chr3 | 12757335 | 12765268 | MAML1 | SCC | 12763238 | 12763824 |
| chr3 | 12749189 | 12754722 | MAX | P493-6 | 12749460 | 12749844 |
| chr3 | 12749189 | 12754722 | MAX | A-549,HCT-116,NCI-H2171,Hep-G2,HeLa-S3,Ishikawa,MDA-MB-231,K-562,liver,SK-N-SH,P493-6 | 12750351 | 12750689 |
| chr3 | 12749189 | 12754722 | MAX | MDA-MB-468,K-562,MDA-MB-231,A-549 | 12751716 | 12751940 |
| chr3 | 12749189 | 12754722 | MAX | MCF-7 | 12753674 | 12753972 |
| chr3 | 12757335 | 12765268 | MAX | NCI-H2171,Ishikawa,P493-6 | 12758079 | 12758265 |
| chr3 | 12757335 | 12765268 | MAX | NCI-H2171 | 12758476 | 12758783 |
| chr3 | 12757335 | 12765268 | MAX | MCF-7,NCI-H2171,HCT-116,Hep-G2,MDA-MB-231 | 12759336 | 12759772 |
| chr3 | 12757335 | 12765268 | MAX | NCI-H2171 | 12760480 | 12760732 |
| chr3 | 12757335 | 12765268 | MAX | A-549,MCF-7,NCI-H2171,Hep-G2,HeLa-S3,Ishikawa,MDA-MB-231,K-562,SK-N-SH | 12763400 | 12763613 |
| chr3 | 12757335 | 12765268 | MAZ | IMR-90 | 12758075 | 12758236 |
| chr3 | 12757335 | 12765268 | MAZ | IMR-90,HEK293 | 12758373 | 12758712 |
| chr3 | 12757335 | 12765268 | MAZ | MCF-7 | 12759279 | 12759630 |
| chr3 | 12757335 | 12765268 | MAZ | HEK293 | 12759489 | 12759794 |
| chr3 | 12757335 | 12765268 | MAZ | K-562,IMR-90,HEK293,HeLa-S3,MCF-7 | 12763385 | 12763649 |
| chr3 | 12749189 | 12754722 | MBD2 | HMLER | 12753723 | 12753963 |
| chr3 | 12757335 | 12765268 | MBD2 | MCF-7 | 12759207 | 12759511 |
| chr3 | 12757335 | 12765268 | MBD2 | MCF-7 | 12763387 | 12763635 |
| chr3 | 12757335 | 12765268 | MBD3 | MCF-7 | 12758820 | 12759001 |
| chr3 | 12757335 | 12765268 | MBD3 | MCF-7 | 12759182 | 12759325 |
| chr3 | 12757335 | 12765268 | MBD3 | MCF-7 | 12759642 | 12759779 |
| chr3 | 12757335 | 12765268 | MBD3 | MCF-7 | 12759900 | 12760050 |
| chr3 | 12749189 | 12754722 | MED12 | leiomyoma,myometrium | 12750736 | 12750836 |
| chr3 | 12749189 | 12754722 | MED12 | leiomyoma | 12750885 | 12750967 |
| chr3 | 12757335 | 12765268 | MED12 | leiomyoma,myometrium | 12763442 | 12763547 |
| chr3 | 12749189 | 12754722 | MEF2B | tonsil,GM12878,DOHH2,KARPAS422,DLBCL | 12749304 | 12749855 |
| chr3 | 12749189 | 12754722 | MEF2B | tonsil,DOHH2 | 12750356 | 12750552 |
| chr3 | 12757335 | 12765268 | MEF2B | GM12878 | 12759615 | 12760115 |
| chr3 | 12757335 | 12765268 | MITF | melanocyte | 12763365 | 12763646 |
| chr3 | 12757335 | 12765268 | MITF | 501-mel | 12764288 | 12764561 |
| chr3 | 12749189 | 12754722 | MLLT1 | GM12878 | 12749498 | 12749942 |
| chr3 | 12749189 | 12754722 | MLLT1 | K-562,GM12878 | 12750596 | 12750912 |
| chr3 | 12749189 | 12754722 | MLLT1 | GM12878 | 12752579 | 12753047 |
| chr3 | 12757335 | 12765268 | MLLT1 | GM12878 | 12757384 | 12758216 |
| chr3 | 12749189 | 12754722 | MNT | K-562 | 12750464 | 12750829 |
| chr3 | 12757335 | 12765268 | MNT | MCF-7 | 12759137 | 12759834 |
| chr3 | 12757335 | 12765268 | MNT | MCF-7 | 12763280 | 12763776 |
| chr3 | 12757335 | 12765268 | MNT | K-562 | 12764365 | 12764692 |
| chr3 | 12749189 | 12754722 | MSX2 | MCF-7 | 12753736 | 12754055 |
| chr3 | 12757335 | 12765268 | MSX2 | MCF-7 | 12759306 | 12759469 |
| chr3 | 12757335 | 12765268 | MTA1 | MCF-7 | 12759944 | 12760265 |
| chr3 | 12749189 | 12754722 | MTA2 | GM12878 | 12749416 | 12749838 |
| chr3 | 12749189 | 12754722 | MTA2 | RH4 | 12750276 | 12750792 |
| chr3 | 12749189 | 12754722 | MTA2 | GM12878 | 12750604 | 12750856 |
| chr3 | 12749189 | 12754722 | MTA2 | GM12878 | 12752946 | 12753187 |
| chr3 | 12757335 | 12765268 | MTA2 | RH4,pre-B-cell | 12763236 | 12763721 |
| chr3 | 12749189 | 12754722 | MTA3 | GM12878 | 12749565 | 12749703 |
| chr3 | 12749189 | 12754722 | MTA3 | K-562 | 12750449 | 12750768 |
| chr3 | 12749189 | 12754722 | MXI1 | IMR-90 | 12750374 | 12750509 |
| chr3 | 12749189 | 12754722 | MXI1 | IMR-90 | 12750642 | 12750921 |
| chr3 | 12757335 | 12765268 | MXI1 | IMR-90 | 12758068 | 12758269 |
| chr3 | 12757335 | 12765268 | MXI1 | IMR-90,SK-N-SH,HeLa-S3 | 12763418 | 12763602 |
| chr3 | 12749189 | 12754722 | MYB | THP-1 | 12749469 | 12749833 |
| chr3 | 12757335 | 12765268 | MYBL2 | Hep-G2 | 12763534 | 12763715 |
| chr3 | 12749189 | 12754722 | MYC | P493-6,Raji | 12749526 | 12749802 |
| chr3 | 12749189 | 12754722 | MYC | K-562,MCF-10A,NCI-H128,NCI-H2171,HFF,U2OS,P493-6 | 12750332 | 12750562 |
| chr3 | 12749189 | 12754722 | MYC | MCF-10A,BJ,U2OS,P493-6 | 12750682 | 12750805 |
| chr3 | 12749189 | 12754722 | MYC | MCF-10A,U2OS,K-562 | 12751700 | 12751888 |
| chr3 | 12749189 | 12754722 | MYC | MCF-7 | 12753701 | 12753866 |
| chr3 | 12757335 | 12765268 | MYC | MCF-10A,P493-6 | 12758097 | 12758246 |
| chr3 | 12757335 | 12765268 | MYC | MCF-10A,NCI-H128,NCI-H2171,MCF-7,GP5D,U2OS | 12759350 | 12759791 |
| chr3 | 12757335 | 12765268 | MYC | P493-6 | 12759821 | 12760009 |
| chr3 | 12757335 | 12765268 | MYC | P493-6 | 12759907 | 12760211 |
| chr3 | 12757335 | 12765268 | MYC | NCI-H2171 | 12760525 | 12760768 |
| chr3 | 12757335 | 12765268 | MYC | MCF-10A,BJ,MCF-7,MDA-MB-231,U2OS,U-87MG,HeLa-S3 | 12763421 | 12763583 |
| chr3 | 12757335 | 12765268 | MYC | Jurkat | 12764316 | 12764508 |
| chr3 | 12749189 | 12754722 | MYCN | SH-EP,SHEP-21N,LNCaP | 12750300 | 12750513 |
| chr3 | 12749189 | 12754722 | MYCN | SHEP-21N,SH-EP,MYCN-3 | 12750613 | 12750815 |
| chr3 | 12757335 | 12765268 | MYCN | SHEP-21N | 12758109 | 12758249 |
| chr3 | 12757335 | 12765268 | MYCN | RH4,SH-EP,SHEP-21N | 12763428 | 12763637 |
| chr3 | 12757335 | 12765268 | MYF5 | Rh18 | 12763420 | 12763623 |
| chr3 | 12757335 | 12765268 | MYNN | Hep-G2 | 12759705 | 12760021 |
| chr3 | 12757335 | 12765268 | MYNN | K-562 | 12763422 | 12763622 |
| chr3 | 12749189 | 12754722 | MYOD1 | RD | 12749515 | 12749714 |
| chr3 | 12749189 | 12754722 | MYOD1 | rhabdomyosarcoma,myoblast,RH30,RD,IMR-90,RH4 | 12750305 | 12750543 |
| chr3 | 12757335 | 12765268 | MYOD1 | IMR-90 | 12758402 | 12758797 |
| chr3 | 12757335 | 12765268 | MYOD1 | IMR-90 | 12759144 | 12759678 |
| chr3 | 12757335 | 12765268 | MYOD1 | rhabdomyosarcoma,myoblast,RH30,RD,IMR-90,SMS-CTR,RH4 | 12763352 | 12763685 |
| chr3 | 12757335 | 12765268 | MYOG | RH4,RH30 | 12763370 | 12763704 |
| chr3 | 12749189 | 12754722 | NCOA2 | MCF-7 | 12753756 | 12753922 |
| chr3 | 12757335 | 12765268 | NCOA2 | MCF-7 | 12759523 | 12759656 |
| chr3 | 12757335 | 12765268 | NCOA2 | MCF-7 | 12759697 | 12759834 |
| chr3 | 12757335 | 12765268 | NCOA2 | MCF-7 | 12759871 | 12760002 |
| chr3 | 12757335 | 12765268 | NCOA2 | MCF-7 | 12763410 | 12763599 |
| chr3 | 12749189 | 12754722 | NCOR1 | OCI-Ly1 | 12749512 | 12749779 |
| chr3 | 12749189 | 12754722 | NCOR2 | OCI-Ly1,B-cell | 12749505 | 12749762 |
| chr3 | 12749189 | 12754722 | NCOR2 | LS180 | 12750323 | 12750423 |
| chr3 | 12757335 | 12765268 | NEUROD1 | K-562 | 12763349 | 12763671 |
| chr3 | 12749189 | 12754722 | NEUROG2 | MRC-5 | 12750310 | 12750572 |
| chr3 | 12749189 | 12754722 | NEUROG2 | MRC-5 | 12750718 | 12751030 |
| chr3 | 12757335 | 12765268 | NEUROG2 | MRC-5 | 12760511 | 12760723 |
| chr3 | 12757335 | 12765268 | NEUROG2 | MRC-5 | 12763376 | 12763657 |
| chr3 | 12749189 | 12754722 | NFATC3 | GM12878 | 12749520 | 12749840 |
| chr3 | 12749189 | 12754722 | NFE2 | K-562 | 12750208 | 12750513 |
| chr3 | 12749189 | 12754722 | NFE2 | K-562 | 12753685 | 12753849 |
| chr3 | 12749189 | 12754722 | NFE2L1 | K-562 | 12750188 | 12750531 |
| chr3 | 12749189 | 12754722 | NFE2L2 | BEAS-2B,K-562,HeLa-S3,A-549,Hep-G2,HAEC,IMR-90 | 12750187 | 12750609 |
| chr3 | 12749189 | 12754722 | NFE2L2 | BEAS-2B | 12751610 | 12751980 |
| chr3 | 12749189 | 12754722 | NFE2L2 | BEAS-2B,A-549 | 12753635 | 12754086 |
| chr3 | 12757335 | 12765268 | NFE2L2 | K-562,BEAS-2B,HeLa-S3,IMR-90 | 12763394 | 12763772 |
| chr3 | 12749189 | 12754722 | NFIC | Ishikawa,SK-N-SH | 12750248 | 12750492 |
| chr3 | 12749189 | 12754722 | NFIC | SK-N-SH | 12750714 | 12751085 |
| chr3 | 12749189 | 12754722 | NFIC | Ishikawa | 12753688 | 12753842 |
| chr3 | 12757335 | 12765268 | NFIC | Ishikawa | 12758086 | 12758542 |
| chr3 | 12757335 | 12765268 | NFIC | SK-N-SH | 12758421 | 12758777 |
| chr3 | 12757335 | 12765268 | NFIC | Ishikawa,SK-N-SH | 12763428 | 12763654 |
| chr3 | 12749189 | 12754722 | NFKB1 | MCF10A-Er-Src,L1236 | 12753019 | 12753134 |
| chr3 | 12749189 | 12754722 | NFKB1 | MCF10A-Er-Src | 12753752 | 12753872 |
| chr3 | 12757335 | 12765268 | NFKB1 | HEK293T | 12758570 | 12758763 |
| chr3 | 12757335 | 12765268 | NFKB1 | MCF10A-Er-Src,HEK293T | 12759374 | 12759536 |
| chr3 | 12757335 | 12765268 | NFKB1 | HEK293T | 12760209 | 12760559 |
| chr3 | 12757335 | 12765268 | NFKB1 | HEK293T | 12760375 | 12760577 |
| chr3 | 12757335 | 12765268 | NFKB1 | MCF10A-Er-Src | 12763484 | 12763616 |
| chr3 | 12757335 | 12765268 | NFKBIZ | Hep-G2 | 12758137 | 12758264 |
| chr3 | 12749189 | 12754722 | NKX3-1 | islet | 12750298 | 12750547 |
| chr3 | 12749189 | 12754722 | NR2F1 | GM12878 | 12749548 | 12749784 |
| chr3 | 12749189 | 12754722 | NR2F1 | K-562 | 12751757 | 12752017 |
| chr3 | 12757335 | 12765268 | NR2F1 | GM12878,K-562 | 12763271 | 12763577 |
| chr3 | 12749189 | 12754722 | NR2F2 | uterus | 12750730 | 12751020 |
| chr3 | 12749189 | 12754722 | NR2F2 | MCF-7 | 12753711 | 12753930 |
| chr3 | 12757335 | 12765268 | NR2F2 | MCF-7 | 12760002 | 12760193 |
| chr3 | 12757335 | 12765268 | NR2F2 | K-562,uterus,MCF-7 | 12763371 | 12763601 |
| chr3 | 12757335 | 12765268 | NR2F2 | K-562 | 12763652 | 12763772 |
| chr3 | 12757335 | 12765268 | NR2F2 | K-562 | 12764290 | 12764473 |
| chr3 | 12757335 | 12765268 | NR2F2 | MCF-7 | 12764843 | 12765145 |
| chr3 | 12749189 | 12754722 | NR3C1 | SUM159PT,MDA-MB-231,BEAS-2B | 12750248 | 12750637 |
| chr3 | 12749189 | 12754722 | NR3C1 | SUM159PT,MDA-MB-231,BEAS-2B | 12750581 | 12750988 |
| chr3 | 12749189 | 12754722 | NR3C1 | BEAS-2B | 12751539 | 12751961 |
| chr3 | 12749189 | 12754722 | NR3C1 | BEAS-2B | 12752797 | 12753164 |
| chr3 | 12749189 | 12754722 | NR3C1 | MCF-7,Ishikawa,BEAS-2B,HCC1937 | 12753690 | 12753937 |
| chr3 | 12757335 | 12765268 | NR3C1 | BEAS-2B | 12758048 | 12758955 |
| chr3 | 12757335 | 12765268 | NR3C1 | Ishikawa,BEAS-2B | 12758099 | 12758588 |
| chr3 | 12757335 | 12765268 | NR3C1 | BEAS-2B | 12758456 | 12758717 |
| chr3 | 12757335 | 12765268 | NR3C1 | BEAS-2B,HCC1937,T47D-A1-2,A-549,MCF-10A,SUM159PT | 12759252 | 12759749 |
| chr3 | 12757335 | 12765268 | NR3C1 | T47D-A1-2 | 12759713 | 12760205 |
| chr3 | 12757335 | 12765268 | NR3C1 | BEAS-2B,HCC1937,Ishikawa,U2OS,A-549,IMR-90,MDA-MB-231,SUM159PT,MCF-7 | 12763345 | 12763721 |
| chr3 | 12749189 | 12754722 | NR4A1 | Kasumi-1 | 12749568 | 12749734 |
| chr3 | 12749189 | 12754722 | NR4A1 | Kasumi-1,MOLM-14 | 12750651 | 12750908 |
| chr3 | 12749189 | 12754722 | NR5A1 | Hep-G2 | 12752073 | 12752206 |
| chr3 | 12749189 | 12754722 | NR5A2 | A-549 | 12750289 | 12750639 |
| chr3 | 12749189 | 12754722 | NRF1 | HeLa-S3 | 12749944 | 12751074 |
| chr3 | 12749189 | 12754722 | NRF1 | HeLa-S3 | 12753397 | 12754003 |
| chr3 | 12757335 | 12765268 | NRF1 | HMEC-1,HCC1954 | 12759240 | 12759729 |
| chr3 | 12757335 | 12765268 | NRF1 | K-562,HMEC-1,MCF-7,HeLa-S3,HCC1954 | 12763425 | 12763688 |
| chr3 | 12749189 | 12754722 | NRIP1 | MCF-7 | 12753723 | 12753942 |
| chr3 | 12757335 | 12765268 | NRIP1 | MCF-7 | 12759343 | 12759501 |
| chr3 | 12757335 | 12765268 | NRIP1 | MCF-7 | 12759761 | 12759956 |
| chr3 | 12757335 | 12765268 | NRIP1 | MCF-7 | 12760003 | 12760216 |
| chr3 | 12757335 | 12765268 | NRIP1 | MCF-7 | 12763372 | 12763617 |
| chr3 | 12749189 | 12754722 | ONECUT2 | MKN74 | 12751625 | 12751803 |
| chr3 | 12757335 | 12765268 | OVOL1 | MCF-7 | 12759377 | 12759550 |
| chr3 | 12757335 | 12765268 | PARP1 | MCF-10A | 12759584 | 12760227 |
| chr3 | 12757335 | 12765268 | PARP1 | MCF-10A | 12763402 | 12763886 |
| chr3 | 12749189 | 12754722 | PAX5 | GM12878 | 12749533 | 12749699 |
| chr3 | 12749189 | 12754722 | PAX5 | fetal | 12750143 | 12750308 |
| chr3 | 12757335 | 12765268 | PAX5 | NALM-6 | 12760504 | 12760861 |
| chr3 | 12749189 | 12754722 | PBX1 | A-549 | 12750298 | 12750517 |
| chr3 | 12749189 | 12754722 | PBX1 | A-549 | 12751590 | 12751803 |
| chr3 | 12749189 | 12754722 | PBX3 | GM12878 | 12750719 | 12750833 |
| chr3 | 12757335 | 12765268 | PBX3 | A-549 | 12763431 | 12763641 |
| chr3 | 12749189 | 12754722 | PGR | T-47D | 12750262 | 12750436 |
| chr3 | 12749189 | 12754722 | PGR | myometrium | 12750519 | 12751068 |
| chr3 | 12749189 | 12754722 | PGR | MCF-7 | 12753652 | 12753959 |
| chr3 | 12757335 | 12765268 | PGR | myometrium | 12757978 | 12758309 |
| chr3 | 12757335 | 12765268 | PGR | MCF-7,T-47D | 12759222 | 12759661 |
| chr3 | 12757335 | 12765268 | PGR | MCF-7,T-47D | 12759935 | 12760316 |
| chr3 | 12757335 | 12765268 | PGR | MCF-7,leiomyoma,myometrium,AB32 | 12763298 | 12763653 |
| chr3 | 12757335 | 12765268 | PHF8 | HeLa | 12763420 | 12763628 |
| chr3 | 12749189 | 12754722 | PKNOX1 | GM12878 | 12750599 | 12750970 |
| chr3 | 12749189 | 12754722 | PKNOX1 | MCF-7,GM12878,K-562 | 12751534 | 12751859 |
| chr3 | 12757335 | 12765268 | PKNOX1 | MCF-7 | 12759108 | 12759596 |
| chr3 | 12757335 | 12765268 | PKNOX1 | MCF-7 | 12760005 | 12760217 |
| chr3 | 12757335 | 12765268 | PKNOX1 | MCF-7 | 12763370 | 12763634 |
| chr3 | 12749189 | 12754722 | PLAG1 | K-562 | 12751715 | 12751908 |
| chr3 | 12757335 | 12765268 | PLAG1 | K-562 | 12758451 | 12758689 |
| chr3 | 12757335 | 12765268 | PLAG1 | K-562 | 12759178 | 12759370 |
| chr3 | 12757335 | 12765268 | PLAG1 | K-562 | 12759439 | 12759979 |
| chr3 | 12757335 | 12765268 | PLAG1 | K-562 | 12764328 | 12764545 |
| chr3 | 12749189 | 12754722 | POU2F1 | T-47D | 12750096 | 12750475 |
| chr3 | 12749189 | 12754722 | POU2F1 | T-47D | 12752885 | 12753091 |
| chr3 | 12749189 | 12754722 | POU2F1 | T-47D | 12753687 | 12753975 |
| chr3 | 12757335 | 12765268 | POU2F1 | T-47D | 12759288 | 12760048 |
| chr3 | 12749189 | 12754722 | POU2F2 | BJAB,GM12891 | 12749530 | 12749684 |
| chr3 | 12757335 | 12765268 | POU2F2 | HNPC | 12764478 | 12764623 |
| chr3 | 12749189 | 12754722 | POU2F3 | NCI-H1048 | 12752878 | 12753087 |
| chr3 | 12757335 | 12765268 | POU5F1 | SKM-1 | 12758487 | 12758760 |
| chr3 | 12757335 | 12765268 | POU5F1 | hiPSC | 12759885 | 12760093 |
| chr3 | 12757335 | 12765268 | POU5F1 | K-562 | 12763385 | 12763513 |
| chr3 | 12757335 | 12765268 | PRDM10 | Hep-G2 | 12759236 | 12759703 |
| chr3 | 12757335 | 12765268 | PRDM10 | Hep-G2 | 12763273 | 12763605 |
| chr3 | 12749189 | 12754722 | PRDM1 | A-549 | 12750280 | 12750521 |
| chr3 | 12757335 | 12765268 | PROX1 | SW480 | 12763330 | 12763482 |
| chr3 | 12749189 | 12754722 | RAD51 | GM12878 | 12750525 | 12750880 |
| chr3 | 12757335 | 12765268 | RAD51 | K-562 | 12764286 | 12764741 |
| chr3 | 12749189 | 12754722 | RB1 | GM12878 | 12749455 | 12749756 |
| chr3 | 12749189 | 12754722 | RBBP4 | SCMC | 12751601 | 12751807 |
| chr3 | 12757335 | 12765268 | RBBP4 | RH5 | 12760297 | 12760517 |
| chr3 | 12757335 | 12765268 | RBBP4 | SCMC,RH5 | 12763324 | 12763688 |
| chr3 | 12749189 | 12754722 | RELA | BJAB | 12749544 | 12749762 |
| chr3 | 12749189 | 12754722 | RELA | HeLa-B2,SW480 | 12750336 | 12750538 |
| chr3 | 12749189 | 12754722 | RELA | BJAB,FaDu | 12750480 | 12750810 |
| chr3 | 12749189 | 12754722 | RELA | SW480,786-O | 12750742 | 12750964 |
| chr3 | 12749189 | 12754722 | RELA | FaDu | 12751600 | 12751878 |
| chr3 | 12749189 | 12754722 | RELA | 786-O,LNCaP,SGBS,FaDu,BJAB,mammary-epithelial-cell | 12752882 | 12753177 |
| chr3 | 12749189 | 12754722 | RELA | Detroit-562,SW480,786-O,LNCaP,KB,FaDu,BJAB,mammary-epithelial-cell,MCF-7 | 12753655 | 12753959 |
| chr3 | 12757335 | 12765268 | RELA | aortic-endothelial-cell | 12758101 | 12758268 |
| chr3 | 12757335 | 12765268 | RELA | aortic-endothelial-cell,FaDu | 12758491 | 12758712 |
| chr3 | 12757335 | 12765268 | RELA | Detroit-562,SGBS,FaDu,GM12878,MCF-7 | 12759418 | 12759779 |
| chr3 | 12757335 | 12765268 | RELA | Detroit-562,SW480,KB,HAEC,FaDu,BJAB,aortic-endothelial-cell | 12763363 | 12763632 |
| chr3 | 12749189 | 12754722 | RELB | GM12878 | 12750567 | 12750870 |
| chr3 | 12749189 | 12754722 | RELB | GM12878 | 12752847 | 12753319 |
| chr3 | 12757335 | 12765268 | RELB | GM12878 | 12757430 | 12757798 |
| chr3 | 12757335 | 12765268 | RELB | GM12878 | 12759731 | 12760031 |
| chr3 | 12749189 | 12754722 | REST | A-549 | 12750323 | 12750504 |
| chr3 | 12757335 | 12765268 | REST | MCF-7 | 12759334 | 12759720 |
| chr3 | 12757335 | 12765268 | REST | A-549,MCF-7 | 12763400 | 12763633 |
| chr3 | 12757335 | 12765268 | RFX1 | MCF-7 | 12759340 | 12759597 |
| chr3 | 12757335 | 12765268 | RFX1 | MCF-7 | 12760155 | 12760581 |
| chr3 | 12757335 | 12765268 | RFX1 | K-562 | 12761440 | 12761685 |
| chr3 | 12749189 | 12754722 | RFX5 | HeLa-S3,Hep-G2 | 12751660 | 12751836 |
| chr3 | 12749189 | 12754722 | RFX5 | Hep-G2 | 12752910 | 12753061 |
| chr3 | 12757335 | 12765268 | RFX5 | HeLa-S3 | 12763447 | 12763671 |
| chr3 | 12749189 | 12754722 | RNF2 | fibroblast,K-562 | 12750316 | 12750525 |
| chr3 | 12749189 | 12754722 | RNF2 | fibroblast | 12750675 | 12750888 |
| chr3 | 12757335 | 12765268 | RNF2 | HMELBRAF | 12763343 | 12763661 |
| chr3 | 12749189 | 12754722 | RUNX1 | Kasumi-1,NB4,BCP-ALL,epididymis,NALM-6,MV4-11 | 12749503 | 12749787 |
| chr3 | 12749189 | 12754722 | RUNX1 | SKH1,MV4-11 | 12750633 | 12750894 |
| chr3 | 12757335 | 12765268 | RUNX1 | AML,CD34 | 12758455 | 12758636 |
| chr3 | 12757335 | 12765268 | RUNX1 | epididymis,MV4-11 | 12763427 | 12763748 |
| chr3 | 12749189 | 12754722 | RUNX1T1 | Kasumi-1 | 12749482 | 12749748 |
| chr3 | 12749189 | 12754722 | RUNX1T1 | Kasumi-1 | 12750675 | 12750788 |
| chr3 | 12749189 | 12754722 | RUVBL2 | U2OS | 12750210 | 12750785 |
| chr3 | 12749189 | 12754722 | RUVBL2 | U2OS | 12750877 | 12751138 |
| chr3 | 12749189 | 12754722 | RXRA | SK-N-SH | 12750800 | 12750997 |
| chr3 | 12757335 | 12765268 | RXRA | JMSU-1,SK-N-SH | 12763379 | 12763645 |
| chr3 | 12757335 | 12765268 | SAFB2 | Hep-G2 | 12763345 | 12763607 |
| chr3 | 12749189 | 12754722 | SCRT1 | HEK293 | 12751574 | 12751852 |
| chr3 | 12749189 | 12754722 | SIN3A | A-549,HCT-116,SK-N-SH | 12750282 | 12750545 |
| chr3 | 12749189 | 12754722 | SIN3A | SK-N-SH | 12750617 | 12750963 |
| chr3 | 12757335 | 12765268 | SIN3A | MCF-7 | 12759219 | 12759591 |
| chr3 | 12757335 | 12765268 | SIN3A | MCF-7 | 12759833 | 12760159 |
| chr3 | 12757335 | 12765268 | SIN3A | WA01,hiPSC,HCT-116,SK-N-SH,MCF-7,A-549 | 12763349 | 12763694 |
| chr3 | 12757335 | 12765268 | SIX5 | A-549 | 12763429 | 12763634 |
| chr3 | 12749189 | 12754722 | SKIL | GM12878 | 12749443 | 12749890 |
| chr3 | 12749189 | 12754722 | SKIL | GM12878 | 12750537 | 12750938 |
| chr3 | 12757335 | 12765268 | SMAD1 | BG03 | 12759192 | 12759288 |
| chr3 | 12749189 | 12754722 | SMAD3 | HCC1954,NCI-H441,HMLE,LX2 | 12750384 | 12750968 |
| chr3 | 12749189 | 12754722 | SMAD3 | HCC1954,SUM159PT | 12751639 | 12752064 |
| chr3 | 12749189 | 12754722 | SMAD3 | NCI-H441 | 12752941 | 12753174 |
| chr3 | 12749189 | 12754722 | SMAD3 | HCC1954,NCI-H441 | 12753570 | 12753988 |
| chr3 | 12757335 | 12765268 | SMAD3 | HCC1954,H69 | 12758093 | 12758370 |
| chr3 | 12757335 | 12765268 | SMAD3 | HMLE,HCC1954 | 12759161 | 12760122 |
| chr3 | 12757335 | 12765268 | SMAD3 | LX2,HMLE,HCC1954,NCI-H441,PC-3 | 12763323 | 12763733 |
| chr3 | 12749189 | 12754722 | SMAD4 | HGrC1 | 12750667 | 12750962 |
| chr3 | 12757335 | 12765268 | SMAD4 | HGrC1 | 12760546 | 12760810 |
| chr3 | 12757335 | 12765268 | SMARCA2 | NPC | 12763220 | 12763802 |
| chr3 | 12757335 | 12765268 | SMARCA2 | NPC | 12763317 | 12763528 |
| chr3 | 12749189 | 12754722 | SMARCA4 | K-562,Aska-SS,BIN-67,endometrial-epithelial-cells,A-549 | 12750254 | 12750550 |
| chr3 | 12749189 | 12754722 | SMARCA4 | K-562,BIN-67,A-549 | 12750668 | 12750890 |
| chr3 | 12749189 | 12754722 | SMARCA4 | A-549 | 12751672 | 12751829 |
| chr3 | 12749189 | 12754722 | SMARCA4 | A-549 | 12752966 | 12753046 |
| chr3 | 12749189 | 12754722 | SMARCA4 | A-549 | 12752979 | 12753045 |
| chr3 | 12749189 | 12754722 | SMARCA4 | MCF-7 | 12753640 | 12753983 |
| chr3 | 12757335 | 12765268 | SMARCA4 | TTC-1240,BIN-67,A-549 | 12758091 | 12758400 |
| chr3 | 12757335 | 12765268 | SMARCA4 | BIN-67 | 12758151 | 12758868 |
| chr3 | 12757335 | 12765268 | SMARCA4 | MCF-7,BIN-67 | 12759447 | 12759751 |
| chr3 | 12757335 | 12765268 | SMARCA4 | MCF-7 | 12759677 | 12760270 |
| chr3 | 12757335 | 12765268 | SMARCA4 | MCF-7,K-562,BIN-67,NPC,endometrial-epithelial-cells,TTC-1240,A-549 | 12763357 | 12763678 |
| chr3 | 12757335 | 12765268 | SMARCA5 | GM12878 | 12759448 | 12759660 |
| chr3 | 12757335 | 12765268 | SMARCA5 | MCF-7 | 12759697 | 12760018 |
| chr3 | 12757335 | 12765268 | SMARCA5 | K-562 | 12764216 | 12764518 |
| chr3 | 12749189 | 12754722 | SMARCB1 | proliferating-human-fibroblast | 12750350 | 12750805 |
| chr3 | 12749189 | 12754722 | SMARCB1 | HeLa-S3,MCF-7 | 12753589 | 12754044 |
| chr3 | 12757335 | 12765268 | SMARCB1 | HeLa-S3 | 12759215 | 12759395 |
| chr3 | 12757335 | 12765268 | SMARCB1 | MCF-7 | 12759234 | 12760344 |
| chr3 | 12757335 | 12765268 | SMARCB1 | proliferating-human-fibroblast,HeLa-S3,MCF-7 | 12763320 | 12763767 |
| chr3 | 12749189 | 12754722 | SMARCC1 | Aska-SS | 12750362 | 12750976 |
| chr3 | 12757335 | 12765268 | SMARCC1 | TTC-1240 | 12758082 | 12758295 |
| chr3 | 12757335 | 12765268 | SMARCC1 | MCF-7 | 12759902 | 12760196 |
| chr3 | 12757335 | 12765268 | SMARCC1 | HeLa-S3,TTC-1240,BIN-67,SCCOHT-1,hiPSC,G-401,MCF-7,HCT-116,Aska-SS | 12763390 | 12763678 |
| chr3 | 12757335 | 12765268 | SMARCC2 | HeLa-S3 | 12763428 | 12763723 |
| chr3 | 12749189 | 12754722 | SMARCD3 | MCF-7 | 12753708 | 12753933 |
| chr3 | 12757335 | 12765268 | SMARCD3 | MCF-7 | 12759205 | 12759497 |
| chr3 | 12757335 | 12765268 | SMARCD3 | MCF-7 | 12759931 | 12760292 |
| chr3 | 12749189 | 12754722 | SMARCE1 | K-562 | 12750146 | 12751200 |
| chr3 | 12749189 | 12754722 | SMARCE1 | MCF-7 | 12753643 | 12753912 |
| chr3 | 12757335 | 12765268 | SMARCE1 | MCF-7 | 12759348 | 12760284 |
| chr3 | 12757335 | 12765268 | SMARCE1 | MCF-7,K-562 | 12763314 | 12763652 |
| chr3 | 12749189 | 12754722 | SNAI2 | PC-9,SMS-CTR,keratinocyte | 12750318 | 12750581 |
| chr3 | 12749189 | 12754722 | SNAI2 | PC-9 | 12750888 | 12751202 |
| chr3 | 12749189 | 12754722 | SNAI2 | keratinocyte | 12751571 | 12751856 |
| chr3 | 12757335 | 12765268 | SNAI2 | PC-9 | 12758150 | 12758858 |
| chr3 | 12757335 | 12765268 | SNAI2 | PC-9 | 12759049 | 12760102 |
| chr3 | 12757335 | 12765268 | SNAI2 | PC-9,keratinocyte | 12759143 | 12759546 |
| chr3 | 12757335 | 12765268 | SOX2 | TT | 12759453 | 12759607 |
| chr3 | 12757335 | 12765268 | SOX2 | TT | 12763431 | 12763608 |
| chr3 | 12749189 | 12754722 | SOX4 | MDA-MB-231 | 12751721 | 12751927 |
| chr3 | 12749189 | 12754722 | SOX4 | HCC1954 | 12751870 | 12752085 |
| chr3 | 12757335 | 12765268 | SOX4 | MDA-MB-231 | 12763346 | 12763601 |
| chr3 | 12749189 | 12754722 | SOX6 | K-562 | 12750338 | 12750581 |
| chr3 | 12757335 | 12765268 | SOX8 | RH4 | 12763314 | 12763702 |
| chr3 | 12757335 | 12765268 | SOX8 | RH4 | 12764404 | 12764729 |
| chr3 | 12749189 | 12754722 | SP1 | GM12878 | 12749554 | 12749685 |
| chr3 | 12749189 | 12754722 | SP1 | A-549 | 12750305 | 12750468 |
| chr3 | 12749189 | 12754722 | SP1 | HCT-116 | 12753658 | 12753972 |
| chr3 | 12757335 | 12765268 | SP1 | GM12878 | 12757529 | 12757649 |
| chr3 | 12757335 | 12765268 | SP1 | HCT-116,Hep-G2 | 12759254 | 12759540 |
| chr3 | 12757335 | 12765268 | SP1 | A-549,HCT-116 | 12763330 | 12763730 |
| chr3 | 12757335 | 12765268 | SP2 | HEK293 | 12763297 | 12763517 |
| chr3 | 12757335 | 12765268 | SP3 | HEK293 | 12759186 | 12759532 |
| chr3 | 12757335 | 12765268 | SP7 | HEK293 | 12758163 | 12758442 |
| chr3 | 12757335 | 12765268 | SP7 | HEK293 | 12759247 | 12759704 |
| chr3 | 12757335 | 12765268 | SP7 | HEK293 | 12763175 | 12763663 |
| chr3 | 12749189 | 12754722 | SPDEF | MCF-7 | 12753489 | 12753934 |
| chr3 | 12757335 | 12765268 | SPDEF | MCF-7 | 12759315 | 12759691 |
| chr3 | 12749189 | 12754722 | SPI1 | GM12891,OCI-Ly7,primary-B-cell,EM-3,K-562,Kasumi-1,NCI-H929,CD34,THP-1,RS4-11 | 12749533 | 12749732 |
| chr3 | 12749189 | 12754722 | SPI1 | U-937,OCI-Ly7 | 12750407 | 12750576 |
| chr3 | 12757335 | 12765268 | SPI1 | GM12891 | 12757486 | 12757608 |
| chr3 | 12757335 | 12765268 | SPI1 | primary-neutrophil,NB4,K-562 | 12760304 | 12760446 |
| chr3 | 12749189 | 12754722 | SPIB | OCI-Ly3 | 12749514 | 12749744 |
| chr3 | 12757335 | 12765268 | SPIB | OCI-Ly3 | 12757457 | 12757634 |
| chr3 | 12757335 | 12765268 | SREBF1 | K-562 | 12763504 | 12763641 |
| chr3 | 12749189 | 12754722 | SREBF2 | HeLa-S3 | 12750388 | 12750973 |
| chr3 | 12749189 | 12754722 | SREBF2 | HeLa-S3 | 12751792 | 12752212 |
| chr3 | 12757335 | 12765268 | SRF | GM12878,Ishikawa,HCT-116 | 12758234 | 12758511 |
| chr3 | 12757335 | 12765268 | SRF | K-562 | 12763309 | 12763449 |
| chr3 | 12749189 | 12754722 | STAT1 | FaDu | 12753692 | 12753931 |
| chr3 | 12757335 | 12765268 | STAT1 | SET-2 | 12758011 | 12758372 |
| chr3 | 12757335 | 12765268 | STAT1 | FaDu | 12759208 | 12759816 |
| chr3 | 12757335 | 12765268 | STAT1 | FaDu | 12763300 | 12763720 |
| chr3 | 12749189 | 12754722 | STAT3 | SU-DHL-10,SU-DHL-2,SU-DHL-4,OCI-Ly7 | 12749556 | 12749774 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC1187,MDA-MB-231,HCC1937,MDA-MB-468,MDA-MB-157,MCF10A-Er-Src,T-47D,HCC70,MDA-MB-453 | 12750280 | 12750521 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC1187,SUM159PT,MDA-MB-231,HCC70 | 12750604 | 12750988 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC70 | 12751643 | 12751803 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC1143 | 12751733 | 12751877 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC70 | 12751809 | 12751967 |
| chr3 | 12749189 | 12754722 | STAT3 | MCF10A-Er-Src | 12752955 | 12753074 |
| chr3 | 12749189 | 12754722 | STAT3 | HCC1187,FaDu,HCC1937,MCF-7,NCI-H358,T-47D,HCC1143,HCC70 | 12753657 | 12753973 |
| chr3 | 12757335 | 12765268 | STAT3 | SUM159PT,HCC70 | 12758085 | 12758330 |
| chr3 | 12757335 | 12765268 | STAT3 | HCC70 | 12758600 | 12758857 |
| chr3 | 12757335 | 12765268 | STAT3 | HCC1187,BT-474,HCC1937,FaDu,MDA-MB-468,MCF-7,MDA-MB-361,SUM159PT,MCF-10A,T-47D,HCC1143,HCC70 | 12759297 | 12759717 |
| chr3 | 12757335 | 12765268 | STAT3 | HCC1187,MCF-7,T-47D | 12759989 | 12760286 |
| chr3 | 12757335 | 12765268 | STAT3 | HCC1187,MDA-MB-231,FaDu,HCC1937,MDA-MB-468,MCF10A-Er-Src,MCF-7,MDA-MB-157,SUM159PT,MCF-10A,T-47D,HCC1143,HCC70 | 12763405 | 12763696 |
| chr3 | 12749189 | 12754722 | SUPT5H | HeLa | 12750368 | 12750532 |
| chr3 | 12749189 | 12754722 | SUPT5H | HeLa | 12751770 | 12751985 |
| chr3 | 12749189 | 12754722 | SUPT5H | HeLa | 12752278 | 12752452 |
| chr3 | 12757335 | 12765268 | SUPT5H | HeLa | 12758104 | 12758359 |
| chr3 | 12757335 | 12765268 | SUPT5H | HeLa | 12758572 | 12758764 |
| chr3 | 12757335 | 12765268 | SUPT5H | HCT-116,HeLa | 12759250 | 12759746 |
| chr3 | 12757335 | 12765268 | SUPT5H | HeLa | 12760069 | 12760468 |
| chr3 | 12757335 | 12765268 | SUPT6H | HCT-116 | 12759454 | 12760562 |
| chr3 | 12757335 | 12765268 | SUPT6H | HCT-116 | 12763402 | 12763637 |
| chr3 | 12757335 | 12765268 | TAF15 | K-562 | 12758523 | 12758736 |
| chr3 | 12757335 | 12765268 | TAF1 | WA01,GM12878 | 12758129 | 12758244 |
| chr3 | 12757335 | 12765268 | TAF1 | SK-N-SH | 12763358 | 12763464 |
| chr3 | 12749189 | 12754722 | TARDBP | GM12878 | 12749518 | 12749772 |
| chr3 | 12749189 | 12754722 | TARDBP | GM12878 | 12750591 | 12750985 |
| chr3 | 12749189 | 12754722 | TARDBP | GM12878 | 12752818 | 12753161 |
| chr3 | 12757335 | 12765268 | TARDBP | K-562 | 12759474 | 12759645 |
| chr3 | 12757335 | 12765268 | TARDBP | GM12878 | 12759694 | 12760111 |
| chr3 | 12757335 | 12765268 | TBP | K-562 | 12763543 | 12763748 |
| chr3 | 12749189 | 12754722 | TBX21 | GM12878 | 12749388 | 12749784 |
| chr3 | 12749189 | 12754722 | TBX21 | Th1,GM12878 | 12750651 | 12750847 |
| chr3 | 12757335 | 12765268 | TBX21 | GM12878 | 12757494 | 12757745 |
| chr3 | 12749189 | 12754722 | TBX5 | cardiomyocyte | 12749424 | 12749724 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S,cardiomyocyte | 12750231 | 12750793 |
| chr3 | 12749189 | 12754722 | TBX5 | cardiomyocyte | 12750359 | 12751268 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S | 12751092 | 12751296 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S,cardiomyocyte | 12751570 | 12752286 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S | 12751581 | 12751821 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S | 12752223 | 12752444 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S | 12752837 | 12753095 |
| chr3 | 12749189 | 12754722 | TBX5 | G296S,cardiomyocyte | 12753628 | 12754019 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12758317 | 12758521 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S,cardiomyocyte | 12758695 | 12759122 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S,cardiomyocyte | 12759167 | 12759676 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12759516 | 12760444 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12759867 | 12760181 |
| chr3 | 12757335 | 12765268 | TBX5 | cardiomyocyte | 12760397 | 12760645 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12760977 | 12761338 |
| chr3 | 12757335 | 12765268 | TBX5 | cardiomyocyte | 12761407 | 12761703 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12761634 | 12761855 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S,cardiomyocyte | 12762118 | 12762446 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S,cardiomyocyte,hiPSC | 12763360 | 12763840 |
| chr3 | 12757335 | 12765268 | TBX5 | G296S | 12764273 | 12764496 |
| chr3 | 12749189 | 12754722 | TCF12 | GM12878 | 12749554 | 12749697 |
| chr3 | 12749189 | 12754722 | TCF12 | A-549 | 12750310 | 12750503 |
| chr3 | 12757335 | 12765268 | TCF12 | A-549,Ishikawa | 12763347 | 12763712 |
| chr3 | 12757335 | 12765268 | TCF21 | HCASMC | 12763350 | 12763679 |
| chr3 | 12749189 | 12754722 | TCF3 | Kasumi-1 | 12749498 | 12749748 |
| chr3 | 12749189 | 12754722 | TCF3 | GM12878 | 12750375 | 12750537 |
| chr3 | 12749189 | 12754722 | TCF3 | GM12878,Kasumi-1 | 12750652 | 12750962 |
| chr3 | 12757335 | 12765268 | TCF3 | NPC | 12763411 | 12763646 |
| chr3 | 12749189 | 12754722 | TCF4 | GEN2-2,CAL-1 | 12749543 | 12749684 |
| chr3 | 12749189 | 12754722 | TEAD1 | adipocyte | 12750162 | 12750514 |
| chr3 | 12749189 | 12754722 | TEAD1 | adipocyte | 12750708 | 12751159 |
| chr3 | 12749189 | 12754722 | TEAD1 | HEK293,keratinocyte | 12751584 | 12751858 |
| chr3 | 12757335 | 12765268 | TEAD1 | HUCCT1,keratinocyte | 12759222 | 12759724 |
| chr3 | 12757335 | 12765268 | TEAD1 | HEK293,keratinocyte,MSTO,HUCCT1,adipocyte | 12763398 | 12763768 |
| chr3 | 12749189 | 12754722 | TEAD4 | hMSC-TERT4,PC-9,SNU-216,T-47D,SK-MEL-147,Ishikawa | 12750208 | 12750465 |
| chr3 | 12749189 | 12754722 | TEAD4 | SK-MEL-147 | 12750668 | 12750872 |
| chr3 | 12749189 | 12754722 | TEAD4 | PC-9 | 12751586 | 12751914 |
| chr3 | 12749189 | 12754722 | TEAD4 | PC-9,T-47D | 12753647 | 12753916 |
| chr3 | 12757335 | 12765268 | TEAD4 | PC-9,MCF-7,T-47D,SNU-216 | 12759254 | 12759648 |
| chr3 | 12757335 | 12765268 | TEAD4 | A-549,SK-N-SH,MDA-MB-231,hMSC-TERT4,PC-9,MCF-7,MCF-10A,SNU-216,Hep-G2,HEK293,SK-MEL-147,MKN28,HCT-116,Ishikawa | 12763393 | 12763717 |
| chr3 | 12757335 | 12765268 | TFAP2A | MCF-7,WA09 | 12759300 | 12759570 |
| chr3 | 12757335 | 12765268 | TFAP2A | MCF-7,WA09 | 12760084 | 12760239 |
| chr3 | 12749189 | 12754722 | TFAP2C | MCF-7,HCC1954 | 12751611 | 12751874 |
| chr3 | 12749189 | 12754722 | TFAP2C | MCF-7,HCC1954 | 12753750 | 12753932 |
| chr3 | 12757335 | 12765268 | TFAP2C | UCLA1-hESCs | 12758518 | 12758753 |
| chr3 | 12757335 | 12765268 | TFAP2C | UCLA1-hESCs | 12758820 | 12759060 |
| chr3 | 12757335 | 12765268 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 12759209 | 12759780 |
| chr3 | 12757335 | 12765268 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 12760013 | 12760270 |
| chr3 | 12757335 | 12765268 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 12763405 | 12763675 |
| chr3 | 12757335 | 12765268 | TFAP4 | DLD-1,Hep-G2,Kasumi-1 | 12763381 | 12763740 |
| chr3 | 12757335 | 12765268 | T | H9 | 12760124 | 12760418 |
| chr3 | 12757335 | 12765268 | THRB | Hep-G2 | 12763289 | 12763572 |
| chr3 | 12749189 | 12754722 | TP53 | U2OS | 12749527 | 12749771 |
| chr3 | 12749189 | 12754722 | TP53 | SW480 | 12750318 | 12750544 |
| chr3 | 12749189 | 12754722 | TP53 | MDA-MB-231 | 12750750 | 12750940 |
| chr3 | 12749189 | 12754722 | TP53 | MCF-7 | 12753690 | 12753916 |
| chr3 | 12757335 | 12765268 | TP53 | HCT-116,U2OS,MCF-7,MCF-10A,SW480,SaOS-2,keratinocyte | 12759279 | 12759608 |
| chr3 | 12757335 | 12765268 | TP53 | SaOS-2 | 12763228 | 12763769 |
| chr3 | 12757335 | 12765268 | TP53 | U2OS,MCF-7,MCF-10A,SW480,MDA-MB-231,SaOS-2,keratinocyte | 12763347 | 12763677 |
| chr3 | 12757335 | 12765268 | TP73 | SaOS-2 | 12759293 | 12759796 |
| chr3 | 12757335 | 12765268 | TP73 | SaOS-2 | 12763297 | 12763752 |
| chr3 | 12749189 | 12754722 | TRIM22 | GM12878 | 12750402 | 12750703 |
| chr3 | 12749189 | 12754722 | TRIM22 | GM12878 | 12752790 | 12753272 |
| chr3 | 12757335 | 12765268 | TRIM22 | GM12878 | 12757546 | 12757810 |
| chr3 | 12757335 | 12765268 | TRIM25 | MDA-MB-231 | 12759426 | 12759713 |
| chr3 | 12757335 | 12765268 | TRIM28 | hESC | 12760954 | 12761138 |
| chr3 | 12757335 | 12765268 | TRPS1 | T-47D | 12759302 | 12759432 |
| chr3 | 12757335 | 12765268 | TRPS1 | MCF-7 | 12763310 | 12763625 |
| chr3 | 12757335 | 12765268 | TSC22D4 | Hep-G2 | 12763427 | 12763593 |
| chr3 | 12749189 | 12754722 | TWIST1 | SHEP-21N | 12750873 | 12751042 |
| chr3 | 12757335 | 12765268 | TWIST1 | SHEP-21N | 12758612 | 12758763 |
| chr3 | 12757335 | 12765268 | TWIST1 | SHEP-21N | 12763478 | 12763678 |
| chr3 | 12757335 | 12765268 | UBTF | K-562 | 12759299 | 12759402 |
| chr3 | 12749189 | 12754722 | USF1 | Ishikawa | 12750304 | 12750417 |
| chr3 | 12749189 | 12754722 | USF1 | SK-N-SH,GM12878,K-562 | 12750672 | 12750804 |
| chr3 | 12749189 | 12754722 | USF1 | K-562,Hep-G2 | 12751720 | 12751876 |
| chr3 | 12757335 | 12765268 | USF1 | HCT-116,Hep-G2 | 12759550 | 12759684 |
| chr3 | 12757335 | 12765268 | USF1 | A-549,K-562 | 12763388 | 12763545 |
| chr3 | 12757335 | 12765268 | USF1 | K-562 | 12764310 | 12764481 |
| chr3 | 12749189 | 12754722 | USF2 | HeLa-S3 | 12750362 | 12750502 |
| chr3 | 12749189 | 12754722 | USF2 | GM12878,IMR-90 | 12750569 | 12750876 |
| chr3 | 12749189 | 12754722 | USF2 | IMR-90 | 12751678 | 12751857 |
| chr3 | 12749189 | 12754722 | USF2 | K-562 | 12752881 | 12753053 |
| chr3 | 12757335 | 12765268 | USF2 | K-562 | 12758417 | 12758769 |
| chr3 | 12757335 | 12765268 | USF2 | K-562 | 12759576 | 12759884 |
| chr3 | 12757335 | 12765268 | USF2 | HeLa-S3,IMR-90 | 12763428 | 12763595 |
| chr3 | 12757335 | 12765268 | USF2 | K-562 | 12764332 | 12764464 |
| chr3 | 12749189 | 12754722 | VDR | LX2 | 12750576 | 12751077 |
| chr3 | 12757335 | 12765268 | VDR | primary-prostate-epithelial-cell | 12759121 | 12759684 |
| chr3 | 12757335 | 12765268 | VDR | THP-1,primary-prostate-epithelial-cell,LX2 | 12763295 | 12763615 |
| chr3 | 12757335 | 12765268 | WDHD1 | MCF-7 | 12763401 | 12763528 |
| chr3 | 12757335 | 12765268 | WT1 | HEK293 | 12758183 | 12758417 |
| chr3 | 12749189 | 12754722 | XBP1 | LNCaP | 12750252 | 12750577 |
| chr3 | 12749189 | 12754722 | YY1 | RH4,SK-N-SH,Ishikawa,HCT-116,A-549,Hep-G2,K-562 | 12750276 | 12750485 |
| chr3 | 12749189 | 12754722 | YY1 | Hep-G2 | 12750823 | 12751105 |
| chr3 | 12749189 | 12754722 | YY1 | HCT-116 | 12753748 | 12753904 |
| chr3 | 12757335 | 12765268 | YY1 | HCT-116 | 12759282 | 12759418 |
| chr3 | 12757335 | 12765268 | YY1 | HCT-116 | 12759529 | 12759683 |
| chr3 | 12757335 | 12765268 | YY1 | RH4,SK-N-SH,Ishikawa,HCT-116,A-549 | 12763419 | 12763688 |
| chr3 | 12757335 | 12765268 | ZBTB20 | HEK293 | 12763223 | 12763769 |
| chr3 | 12749189 | 12754722 | ZBTB2 | GM12878 | 12749545 | 12749659 |
| chr3 | 12757335 | 12765268 | ZBTB2 | GM12878 | 12758036 | 12758130 |
| chr3 | 12757335 | 12765268 | ZBTB33 | A-549 | 12763430 | 12763634 |
| chr3 | 12757335 | 12765268 | ZBTB6 | HEK293 | 12758156 | 12758691 |
| chr3 | 12757335 | 12765268 | ZBTB6 | HEK293 | 12763238 | 12763589 |
| chr3 | 12757335 | 12765268 | ZBTB7A | Ishikawa | 12758505 | 12758667 |
| chr3 | 12757335 | 12765268 | ZBTB7A | K-562 | 12763372 | 12763469 |
| chr3 | 12757335 | 12765268 | ZBTB7A | K-562 | 12763564 | 12763659 |
| chr3 | 12757335 | 12765268 | ZBTB7B | MCF-7 | 12759295 | 12759598 |
| chr3 | 12757335 | 12765268 | ZBTB7B | MCF-7 | 12759947 | 12760226 |
| chr3 | 12757335 | 12765268 | ZFP36 | GM12878 | 12758075 | 12758301 |
| chr3 | 12757335 | 12765268 | ZFP36 | K-562 | 12763406 | 12763601 |
| chr3 | 12757335 | 12765268 | ZFP64 | HEK293 | 12763339 | 12763615 |
| chr3 | 12749189 | 12754722 | ZFX | MCF-7 | 12753624 | 12753974 |
| chr3 | 12757335 | 12765268 | ZFX | HCT-116,MCF-7 | 12759282 | 12759931 |
| chr3 | 12757335 | 12765268 | ZHX1 | HeLa-S3 | 12763462 | 12763687 |
| chr3 | 12757335 | 12765268 | ZHX2 | MCF-7 | 12763456 | 12763641 |
| chr3 | 12749189 | 12754722 | ZKSCAN1 | MCF-7 | 12752096 | 12752330 |
| chr3 | 12749189 | 12754722 | ZKSCAN1 | HeLa-S3,Hep-G2,K-562,MCF-7 | 12754373 | 12754653 |
| chr3 | 12757335 | 12765268 | ZKSCAN1 | HeLa-S3,MCF-7,K-562,Hep-G2 | 12763150 | 12763580 |
| chr3 | 12757335 | 12765268 | ZKSCAN1 | K-562 | 12764368 | 12764518 |
| chr3 | 12749189 | 12754722 | ZNF143 | MCF-7,Hep-G2 | 12750268 | 12750486 |
| chr3 | 12749189 | 12754722 | ZNF143 | FLP76 | 12751060 | 12751207 |
| chr3 | 12749189 | 12754722 | ZNF143 | FLP76 | 12751869 | 12752016 |
| chr3 | 12749189 | 12754722 | ZNF143 | MCF-7 | 12753797 | 12754005 |
| chr3 | 12757335 | 12765268 | ZNF143 | FLP76,MCF-7,FLP143HA | 12759268 | 12759616 |
| chr3 | 12757335 | 12765268 | ZNF143 | MCF-7 | 12763452 | 12763612 |
| chr3 | 12757335 | 12765268 | ZNF175 | Hep-G2 | 12763436 | 12763560 |
| chr3 | 12757335 | 12765268 | ZNF184 | HEK293 | 12763345 | 12763586 |
| chr3 | 12749189 | 12754722 | ZNF189 | HEK293 | 12751728 | 12751953 |
| chr3 | 12757335 | 12765268 | ZNF189 | HEK293 | 12760286 | 12760666 |
| chr3 | 12757335 | 12765268 | ZNF189 | HEK293 | 12763362 | 12763623 |
| chr3 | 12749189 | 12754722 | ZNF207 | GM12878 | 12749443 | 12749732 |
| chr3 | 12749189 | 12754722 | ZNF207 | MCF-7 | 12751937 | 12752190 |
| chr3 | 12757335 | 12765268 | ZNF213 | HEK293 | 12758072 | 12758343 |
| chr3 | 12749189 | 12754722 | ZNF217 | GM12878 | 12749334 | 12749617 |
| chr3 | 12757335 | 12765268 | ZNF217 | Hep-G2 | 12759203 | 12759411 |
| chr3 | 12757335 | 12765268 | ZNF217 | MCF-7 | 12759832 | 12760396 |
| chr3 | 12757335 | 12765268 | ZNF22 | HEK293 | 12757565 | 12757701 |
| chr3 | 12749189 | 12754722 | ZNF24 | K-562 | 12751966 | 12752283 |
| chr3 | 12757335 | 12765268 | ZNF24 | MCF-7 | 12759338 | 12759554 |
| chr3 | 12757335 | 12765268 | ZNF24 | HEK293 | 12763342 | 12763674 |
| chr3 | 12757335 | 12765268 | ZNF257 | HEK293T | 12759152 | 12759275 |
| chr3 | 12757335 | 12765268 | ZNF263 | K-562 | 12761140 | 12761419 |
| chr3 | 12757335 | 12765268 | ZNF263 | K-562 | 12763518 | 12763810 |
| chr3 | 12757335 | 12765268 | ZNF2 | HEK293 | 12763368 | 12763620 |
| chr3 | 12749189 | 12754722 | ZNF311 | HEK293 | 12754387 | 12754649 |
| chr3 | 12757335 | 12765268 | ZNF317 | HEK293 | 12758568 | 12758724 |
| chr3 | 12757335 | 12765268 | ZNF335 | HEK293 | 12757719 | 12758893 |
| chr3 | 12757335 | 12765268 | ZNF335 | HEK293 | 12763188 | 12763783 |
| chr3 | 12757335 | 12765268 | ZNF341 | HEK293 | 12760230 | 12760504 |
| chr3 | 12749189 | 12754722 | ZNF35 | HEK293 | 12749754 | 12750052 |
| chr3 | 12757335 | 12765268 | ZNF35 | HEK293 | 12758258 | 12758397 |
| chr3 | 12757335 | 12765268 | ZNF35 | HEK293 | 12763333 | 12763472 |
| chr3 | 12749189 | 12754722 | ZNF366 | HEK293 | 12753006 | 12753315 |
| chr3 | 12757335 | 12765268 | ZNF366 | HEK293 | 12758008 | 12758448 |
| chr3 | 12757335 | 12765268 | ZNF366 | HEK293 | 12759369 | 12759762 |
| chr3 | 12757335 | 12765268 | ZNF366 | HEK293 | 12763233 | 12763611 |
| chr3 | 12757335 | 12765268 | ZNF384 | K-562 | 12758098 | 12758213 |
| chr3 | 12757335 | 12765268 | ZNF394 | HEK293 | 12763388 | 12763794 |
| chr3 | 12749189 | 12754722 | ZNF398 | HEK293 | 12749592 | 12750013 |
| chr3 | 12749189 | 12754722 | ZNF398 | HEK293 | 12751662 | 12751997 |
| chr3 | 12757335 | 12765268 | ZNF398 | HEK293 | 12758135 | 12758868 |
| chr3 | 12757335 | 12765268 | ZNF398 | HEK293 | 12759150 | 12759828 |
| chr3 | 12749189 | 12754722 | ZNF407 | Hep-G2 | 12750296 | 12750454 |
| chr3 | 12749189 | 12754722 | ZNF554 | HEK293 | 12750352 | 12750507 |
| chr3 | 12749189 | 12754722 | ZNF554 | HEK293 | 12751686 | 12751912 |
| chr3 | 12757335 | 12765268 | ZNF554 | HEK293 | 12763376 | 12763631 |
| chr3 | 12757335 | 12765268 | ZNF573 | HEK293T | 12759194 | 12759426 |
| chr3 | 12757335 | 12765268 | ZNF573 | HEK293T | 12762446 | 12762730 |
| chr3 | 12757335 | 12765268 | ZNF592 | MCF-7 | 12759119 | 12759781 |
| chr3 | 12757335 | 12765268 | ZNF592 | MCF-7 | 12759964 | 12760213 |
| chr3 | 12749189 | 12754722 | ZNF671 | HEK293T | 12751691 | 12751907 |
| chr3 | 12757335 | 12765268 | ZNF92 | retina | 12764213 | 12764459 |
| chr3 | 12757335 | 12765268 | ZNF92 | retina | 12764594 | 12764781 |