SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200962
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr12:52992030-53015788
Size: 23758
Super-enhancer rank 962
Number of SE elements: 3
ChIP density(Case|Control): 38678.024|3537.5662
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EIF4B ;
ROSE Overlap EIF4B ;
ROSE Proximal KRT18 ; TNS2 ; LOC283335 ; KRT8 ; MIR6757 ;
ROSE Closest EIF4B ;
Lasso EIF4B ; KRT18 ; TENC1 ; CSAD ; SPRYD3 ; SOAT2 ; KRT8 ; KRT79 ;
PreSTIGE ;
ABC ;
BETA SOAT2 ; MIR6757 ; LOC283335 ; TNS2 ; SPRYD3 ; KRT18 ; EIF4B ; KRT8 ; IGFBP6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200962 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers