SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200319
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:14401671-14440471
Size: 38800
Super-enhancer rank 319
Number of SE elements: 7
ChIP density(Case|Control): 67865.08|6809.4
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC6A6 ;
ROSE Overlap SLC6A6 ;
ROSE Proximal LINC01267 ; SLC6A6 ;
ROSE Closest SLC6A6 ;
Lasso ;
PreSTIGE ;
ABC LINC01267 ;
BETA SLC6A6 ; LINC01267 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200319 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers