SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200054
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr16:88766491-88786049
Size: 19558
Super-enhancer rank 54
Number of SE elements: 1
ChIP density(Case|Control): 119358.5624|3921.379
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIEZO1 ;
ROSE Overlap PIEZO1 ;
ROSE Proximal LOC339059 ; CDT1 ; APRT ; LOC100289580 ;
ROSE Closest PIEZO1 ;
Lasso ;
PreSTIGE ;
ABC CTU2 ; RNF166 ;
BETA PABPN1L ; CTU2 ; APRT ; MIR4722 ; TRAPPC2L ; LOC100289580 ; RNF166 ; SNAI3 ; GALNS ; LOC339059 ; PIEZO1 ; CDT1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200054 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers