SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_289100623
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: hESC
Biosample name: H1_FOXA1_2_Exon_Deletion_PP2
Genomic region: chr18:9913318-9918567
Size: 5249
Super-enhancer rank 623
Number of SE elements: 2
ChIP density(Case|Control): 18613.4789|1946.3292
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VAPA ;
ROSE Overlap VAPA ;
ROSE Proximal TXNDC2 ; VAPA ;
ROSE Closest VAPA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_289100623 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers