SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_275500809
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO2 (IDH1-R132H)
Genomic region: chr17:57917802-57955909
Size: 38107
Super-enhancer rank 809
Number of SE elements: 8
ChIP density(Case|Control): 34056.2259|3300.0662
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CUEDC1 ;
ROSE Overlap CUEDC1 ;
ROSE Proximal CUEDC1 ; VEZF1 ;
ROSE Closest CUEDC1 ;
Lasso ;
PreSTIGE ;
ABC LOC105371849 ; HEATR6 ; LOC101927755 ; RNFT1 ; RPS6KB1 ; TUBD1 ; PTRH2 ; VMP1 ; CLTC ; DHX40 ; YPEL2 ; GDPD1 ; C17orf64 ; LOC653653 ; WFDC21P ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_275500809 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers