SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_275500575
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO2 (IDH1-R132H)
Genomic region: chr12:6322901-6373372
Size: 50471
Super-enhancer rank 575
Number of SE elements: 7
ChIP density(Case|Control): 45191.7334|7484.8493
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF1A ;
ROSE Overlap PLEKHG6 ; SCNN1A ; TNFRSF1A ;
ROSE Proximal LTBR ;
ROSE Closest TNFRSF1A ;
Lasso ;
PreSTIGE ;
ABC CD9 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_275500575 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers