SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_270300832
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_serumWD_back3h
Genomic region: chr5:31910272-31922837
Size: 12565
Super-enhancer rank 832
Number of SE elements: 4
ChIP density(Case|Control): 16120.895|2677.6015
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4279 ;
ROSE Overlap PDZD2 ;
ROSE Proximal MIR4279 ;
ROSE Closest MIR4279 ;
Lasso ;
PreSTIGE ;
ABC PDZD2 ; C5orf22 ; DROSHA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_270300832 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers