SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200033
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr7:22560021-22613741
Size: 53720
Super-enhancer rank 33
Number of SE elements: 9
ChIP density(Case|Control): 124415.52|5398.86
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100506178 ;
ROSE Overlap LOC100506178 ;
ROSE Proximal ;
ROSE Closest LOC100506178 ;
Lasso ;
PreSTIGE ;
ABC LOC100506178 ; LOC401312 ; IL6 ; LOC541472 ; TOMM7 ; FAM126A ; CDCA7L ; SP4 ; SP8 ; KLHL7-AS1 ; KLHL7 ; NUPL2 ; GPNMB ; MALSU1 ; IGF2BP3 ; ABCB5 ; RPS2P32 ; TRA2A ; CCDC126 ; FAM221A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200033 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers