SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_238800878
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 1033
Genomic region: chr1:228130541-228163897
Size: 33356
Super-enhancer rank 878
Number of SE elements: 7
ChIP density(Case|Control): 16561.254|2675.1512
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GJC2 ;
ROSE Overlap GUK1 ; GJC2 ;
ROSE Proximal MRPL55 ; IBA57-AS1 ; GUK1 ; IBA57 ; C1orf35 ; OBSCN ; C1orf145 ; ARF1 ; MIR3620 ;
ROSE Closest GJC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238800878 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers