SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_234000164
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.untreated.R1
Genomic region: chr3:8442417-8462047
Size: 19630
Super-enhancer rank 164
Number of SE elements: 12
ChIP density(Case|Control): 14812.798|1931.592
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMCD1-AS1 ;
ROSE Overlap LMCD1-AS1 ;
ROSE Proximal LMCD1 ;
ROSE Closest LMCD1-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_234000164 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers