SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_230200904
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: RERFGC1B
Genomic region: chr1:155125137-155131064
Size: 5927
Super-enhancer rank 904
Number of SE elements: 3
ChIP density(Case|Control): 20330.2027|960.7667
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EFNA1 ;
ROSE Overlap EFNA1 ;
ROSE Proximal EFNA1 ; KRTCAP2 ; TRIM46 ; SLC50A1 ; EFNA3 ; DPM3 ;
ROSE Closest EFNA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_230200904 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers