SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_229400093
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: IM95
Genomic region: chr3:190344064-190384002
Size: 39938
Super-enhancer rank 93
Number of SE elements: 29
ChIP density(Case|Control): 56943.6004|4688.7212
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN16 ;
ROSE Overlap ;
ROSE Proximal CLDN1 ; CLDN16 ;
ROSE Closest CLDN16 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_229400093 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers