SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_221900586
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr6_GL000255v2_alt:4465589-4518556
Size: 52967
Super-enhancer rank 586
Number of SE elements: 16
ChIP density(Case|Control): 23660.3589|1965.0757
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap DAXX ; WDR46 ; PFDN6 ; MIR6873 ; B3GALT4 ; RPS18 ; MIR6834 ; VPS52 ; RGL2 ; TAPBP ; ZBTB22 ;
ROSE Proximal ;
ROSE Closest VPS52 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900586 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers