SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_221900559
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr1:145886972-145912431
Size: 25459
Super-enhancer rank 559
Number of SE elements: 13
ChIP density(Case|Control): 24450.8236|2054.5413
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGA10 ;
ROSE Overlap ITGA10 ; PEX11B ;
ROSE Proximal NUDT17 ; RBM8A ; LIX1L ; GNRHR2 ; PIAS3 ; ANKRD35 ; PEX11B ; MIR6736 ;
ROSE Closest ITGA10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900559 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers