SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_221100550
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: HCC3153
Genomic region: chr6:128490392-128522026
Size: 31634
Super-enhancer rank 550
Number of SE elements: 13
ChIP density(Case|Control): 20843.6426|2363.0598
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPRK ;
ROSE Overlap PTPRK ;
ROSE Proximal PTPRK ;
ROSE Closest PTPRK ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221100550 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers