SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_213100265
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116
Genomic region: chr9:37465938-37482726
Size: 16788
Super-enhancer rank 265
Number of SE elements: 12
ChIP density(Case|Control): 41169.2124|2098.5
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZBTB5 ;
ROSE Overlap ;
ROSE Proximal POLR1E ; GRHPR ; ZBTB5 ;
ROSE Closest ZBTB5 ;
Lasso ;
PreSTIGE ;
ABC POLR1E ; ZBTB5 ; GRHPR ; ALDH1B1 ; ANKRD18A ; FAM201A ; SLC25A51 ; DCAF10 ; EXOSC3 ; TRMT10B ; FRMPD1 ; TOMM5 ; ZCCHC7 ; EBLN3P ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_213100265 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers