SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_198401400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr10:97403456-97428568
Size: 25112
Super-enhancer rank 1400
Number of SE elements: 15
ChIP density(Case|Control): 9140.768|1933.624
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PGAM1 ;
ROSE Overlap PGAM1 ;
ROSE Proximal ZDHHC16 ; RRP12 ; EXOSC1 ;
ROSE Closest PGAM1 ;
Lasso ;
PreSTIGE FRAT1 ; FRAT2 ; RRP12 ;
ABC ALDH18A1 ; TCTN3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198401400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers