SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198400043
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr1:182232468-182394719
Size: 162251
Super-enhancer rank 43
Number of SE elements: 71
ChIP density(Case|Control): 67334.165|23201.893
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01344 ;
ROSE Overlap GLUL ; LINC01344 ;
ROSE Proximal LINC00272 ; GLUL ; TEDDM1 ;
ROSE Closest LINC01344 ;
Lasso ;
PreSTIGE ;
ABC LINC01686 ; LINC01344 ; RGS16 ; NPL ; LINC01732 ; DHX9 ; LAMC1 ; LAMC2 ; SMG7-AS1 ; SMG7 ; NCF2 ; ZNF648 ; ARPC5 ; GLUL ; RGL1 ; RNASEL ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400043 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers