SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_171500705
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 100nM PCI-24781
Genomic region: chr9:35726378-35734554
Size: 8176
Super-enhancer rank 705
Number of SE elements: 1
ChIP density(Case|Control): 21118.608|1201.0544
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CREB3 ;
ROSE Overlap TLN1 ; MIR6853 ; CREB3 ;
ROSE Proximal MIR6852 ; TPM2 ; RGP1 ; GBA2 ; MSMP ;
ROSE Closest CREB3 ;
Lasso ;
PreSTIGE ;
ABC MSMP ; RGP1 ; GBA2 ; TLN1 ; CREB3 ; TPM2 ; CA9 ; ARHGEF39 ; CCDC107 ; LOC101926948 ; CD72 ; TESK1 ; HRCT1 ; RECK ; TMEM8B ; FAM221B ; HINT2 ; SPAG8 ; RUSC2 ; FAM166B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171500705 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers