SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170100359
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr19:55471352-55478177
Size: 6825
Super-enhancer rank 359
Number of SE elements: 1
ChIP density(Case|Control): 26639.34|522.795
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF628 ;
ROSE Overlap ZNF628 ;
ROSE Proximal SSC5D ; NAT14 ; ISOC2 ; SHISA7 ;
ROSE Closest ZNF628 ;
Lasso ZNF581 ; SBK2 ; SSC5D ; UBE2S ; SHISA7 ; ZNF580 ; NAT14 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100359 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers