SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170100118
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr1:31916084-31964245
Size: 48161
Super-enhancer rank 118
Number of SE elements: 8
ChIP density(Case|Control): 53574.2964|3833.6156
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTP4A2 ;
ROSE Overlap PTP4A2 ;
ROSE Proximal KHDRBS1 ; PTP4A2 ;
ROSE Closest PTP4A2 ;
Lasso FAM167B ; COL16A1 ; TXLNA ; KHDRBS1 ; BAI2 ; TMEM39B ; KPNA6 ; TMEM234 ; IQCC ; PTP4A2 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100118 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers