SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169301006
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr7:73232933-73250518
Size: 17585
Super-enhancer rank 1006
Number of SE elements: 4
ChIP density(Case|Control): 35219.238|2096.132
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NSUN5 ;
ROSE Overlap NCF1B ;
ROSE Proximal ;
ROSE Closest NCF1B ;
Lasso ;
PreSTIGE ;
ABC CLDN3 ; CLDN4 ; WBSCR27 ; MLXIPL ; DNAJC30 ; BUD23 ; ABHD11-AS1 ; ABHD11 ; CLIP2 ; EIF4H ; LIMK1 ; TBL2 ; NSUN5 ; SBDSP1 ; TYW1B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169301006 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers