SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300061
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr19:45427761-45485939
Size: 58178
Super-enhancer rank 61
Number of SE elements: 9
ChIP density(Case|Control): 147231.0646|6492.6648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FOSB ;
ROSE Overlap RTN2 ; MIR6088 ; FOSB ;
ROSE Proximal CD3EAP ; VASP ; PPP1R13L ; PPM1N ; ERCC1 ;
ROSE Closest FOSB ;
Lasso ;
PreSTIGE ;
ABC CLPTM1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300061 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers