SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_167400159
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Palb [DLD-1]
Genomic region: chr13:27952996-27972393
Size: 19397
Super-enhancer rank 159
Number of SE elements: 12
ChIP density(Case|Control): 34891.3236|1495.5087
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDX2 ;
ROSE Overlap CDX2 ;
ROSE Proximal PDX1-AS1 ; ATP5EP2 ; PDX1 ; URAD ;
ROSE Closest CDX2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_167400159 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers