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Super-enhancer overview

SE ID: SE_02_166500792
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr17:7834009-7851437
Size: 17428
Super-enhancer rank 792
Number of SE elements: 3
ChIP density(Case|Control): 39502.3048|2497.4324
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KDM6B ;
ROSE Overlap KDM6B ;
ROSE Proximal CYB5D1 ; CHD3 ; TMEM88 ; NAA38 ;
ROSE Closest KDM6B ;
Lasso TRAPPC1 ; SLC35G6 ; NAA38 ; KCNAB3 ; ZBTB4 ; EFNB3 ; ACAP1 ; TP53 ; EIF4A1 ; C17orf59 ; ALOX15B ; GUCY2D ; SHBG ; DNAH2 ; CD68 ; ALOXE3 ; SAT2 ; TMEM88 ; KDM6B ; ATP1B2 ; WRAP53 ; CHD3 ; KRBA2 ; CYB5D1 ; CNTROB ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500792 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers