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Super-enhancer overview

SE ID: SE_02_166500563
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr19:38673856-38687845
Size: 13989
Super-enhancer rank 563
Number of SE elements: 2
ChIP density(Case|Control): 47003.04|2054.9841
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ACTN4 ;
ROSE Overlap ACTN4 ;
ROSE Proximal ;
ROSE Closest ACTN4 ;
Lasso CAPN12 ; LGALS7B ; HNRNPL ; EIF3K ; ECH1 ; ACTN4 ; MAP4K1 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500563 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers