SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr4:1292270-1352573
Size: 60303
Super-enhancer rank 239
Number of SE elements: 15
ChIP density(Case|Control): 40306.5252|4480.5129
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAEA ;
ROSE Overlap MAEA ; UVSSA ;
ROSE Proximal CTBP1 ; MAEA ; CTBP1-AS2 ; CRIPAK ;
ROSE Closest MAEA ;
Lasso ;
PreSTIGE ;
ABC FGFR3 ; UVSSA ; MAEA ; CTBP1-AS2 ; CTBP1 ; LOC100130872 ; FGFRL1 ; DGKQ ; GAK ; TMEM175 ; LOC100129917 ; PIGG ; ZNF721 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers