SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164400302
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR1 Nutlin3a 10h
Genomic region: chr19:47225430-47233771
Size: 8341
Super-enhancer rank 302
Number of SE elements: 1
ChIP density(Case|Control): 32310.5317|698.9758
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BBC3 ;
ROSE Overlap MIR3190 ; BBC3 ; MIR3191 ;
ROSE Proximal INAFM1 ; CCDC9 ; BBC3 ;
ROSE Closest BBC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164400302 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers