SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_162800750
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr4:51141-56537
Size: 5396
Super-enhancer rank 750
Number of SE elements: 3
ChIP density(Case|Control): 8704.8272|2235.5628
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF595 ;
ROSE Overlap ZNF595 ;
ROSE Proximal ZNF595 ;
ROSE Closest ZNF595 ;
Lasso ;
PreSTIGE ;
ABC UVSSA ; MAEA ; CTBP1-AS2 ; CTBP1 ; LOC100130872 ; FGFRL1 ; SLC26A1 ; IDUA ; ZNF595 ; ZNF718 ; ABCA11P ; ZNF721 ; PIGG ; ATP5I ; MYL5 ; PCGF3 ; LOC100129917 ; TMEM175 ; GAK ; FAM53A ; SLBP ; FGFR3 ; NELFA ; C4orf48 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800750 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers