SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156001474
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:64758393-64768266
Size: 9873
Super-enhancer rank 1474
Number of SE elements: 3
ChIP density(Case|Control): 9779.2065|1199.5695
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PYGM ;
ROSE Overlap PYGM ; SF1 ;
ROSE Proximal RASGRP2 ; MEN1 ; NRXN2 ; MAP4K2 ; PYGM ;
ROSE Closest PYGM ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NRXN2 ; CDC42BPG ; MAP4K2 ; RASGRP2 ; MEN1 ; SF1 ; PYGM ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001474 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers