SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156001452
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:50920953-50940563
Size: 19610
Super-enhancer rank 1452
Number of SE elements: 4
ChIP density(Case|Control): 11328.697|2639.506
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: METTL7A ;
ROSE Overlap METTL7A ;
ROSE Proximal HIGD1C ;
ROSE Closest METTL7A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC11A2 ; TMPRSS12 ; METTL7A ; HIGD1C ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001452 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers