SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156001442
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:18277152-18298328
Size: 21176
Super-enhancer rank 1442
Number of SE elements: 12
ChIP density(Case|Control): 11841.6192|3123.46
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLEKHA5 ;
ROSE Overlap PIK3C2G ;
ROSE Proximal PIK3C2G ;
ROSE Closest PIK3C2G ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PIK3C2G ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001442 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers