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Super-enhancer overview

SE ID: SE_02_156001367
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:56006655-56026348
Size: 19693
Super-enhancer rank 1367
Number of SE elements: 6
ChIP density(Case|Control): 11496.7734|2404.5153
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IKZF4 ;
ROSE Overlap IKZF4 ;
ROSE Proximal CDK2 ; PMEL ; RAB5B ; SUOX ; RPS26 ;
ROSE Closest IKZF4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DGKA ; WIBG ; RAB5B ; IKZF4 ; PMEL ; CDK2 ; ERBB3 ; PA2G4 ; SUOX ; RPS26 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001367 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers