SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156001292
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr19:1269216-1276799
Size: 7583
Super-enhancer rank 1292
Number of SE elements: 1
ChIP density(Case|Control): 10495.6303|1063.1366
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C19ORF24 ;
ROSE Overlap CIRBP-AS1 ; CIRBP ; C19orf24 ;
ROSE Proximal ATP5D ; CBARP ; MIDN ; EFNA2 ;
ROSE Closest C19orf24 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MUM1 ; C19orf26 ; CIRBP ; ATP5D ; EFNA2 ; CIRBP-AS1 ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001292 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers