SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156001275
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr15:40327616-40341517
Size: 13901
Super-enhancer rank 1275
Number of SE elements: 8
ChIP density(Case|Control): 10991.5207|1506.8684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C15ORF52 ;
ROSE Overlap C15orf52 ;
ROSE Proximal KNSTRN ; PHGR1 ; PLCB2 ; INAFM2 ; DISP2 ; ANKRD63 ;
ROSE Closest C15orf52 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA INAFM2 ; IVD ; KNSTRN ; PLCB2 ; DISP2 ; PAK6 ; PHGR1 ; ANKRD63 ; C15orf52 ; C15orf56 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001275 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers