SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156001264
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:120168820-120190095
Size: 21275
Super-enhancer rank 1264
Number of SE elements: 4
ChIP density(Case|Control): 11926.765|2365.78
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OAF ;
ROSE Overlap ;
ROSE Proximal OAF ; POU2F3 ; TRIM29 ;
ROSE Closest OAF ;
Lasso ;
PreSTIGE ;
ABC ;
BETA POU2F3 ; TRIM29 ; LOC649133 ; OAF ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001264 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers