SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156001229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr15:68813018-68822144
Size: 9126
Super-enhancer rank 1229
Number of SE elements: 2
ChIP density(Case|Control): 10975.8402|1263.951
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANP32A ;
ROSE Overlap ANP32A ;
ROSE Proximal MIR4312 ; ANP32A-IT1 ;
ROSE Closest ANP32A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ANP32A-IT1 ; MIR4312 ; ANP32A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers