SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156001208
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:96211942-96264421
Size: 52479
Super-enhancer rank 1208
Number of SE elements: 10
ChIP density(Case|Control): 16168.7799|6328.9674
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ELK3 ;
ROSE Overlap ELK3 ;
ROSE Proximal ;
ROSE Closest ELK3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ELK3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001208 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers