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Super-enhancer overview

SE ID: SE_02_156001206
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr19:46296536-46304406
Size: 7870
Super-enhancer rank 1206
Number of SE elements: 1
ChIP density(Case|Control): 10811.019|955.418
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIF3A ;
ROSE Overlap HIF3A ;
ROSE Proximal PPP5C ;
ROSE Closest HIF3A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIF3A ; DKFZp434J0226 ; PPP5C ; IGFL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001206 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers