SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_156001113
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr6:89078517-89084052
Size: 5535
Super-enhancer rank 1113
Number of SE elements: 2
ChIP density(Case|Control): 11193.984|783.756
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PNRC1;
ROSE Overlap PNRC1;
ROSE Proximal SRSF12;
ROSE Closest PNRC1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001113 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers