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Super-enhancer overview

SE ID: SE_02_156001030
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr19:1342893-1374641
Size: 31748
Super-enhancer rank 1030
Number of SE elements: 6
ChIP density(Case|Control): 14423.1164|3546.2516
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MUM1 ;
ROSE Overlap MUM1 ;
ROSE Proximal DAZAP1 ; GAMT ; NDUFS7 ;
ROSE Closest MUM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MUM1 ; APC2 ; GAMT ; DAZAP1 ; CIRBP ; EFNA2 ; CIRBP-AS1 ; NDUFS7 ; RPS15 ; C19orf24 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001030 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers