SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156001011
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:45067957-45102929
Size: 34972
Super-enhancer rank 1011
Number of SE elements: 9
ChIP density(Case|Control): 14992.4964|4007.7912
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRDM11 ;
ROSE Overlap PRDM11 ;
ROSE Proximal PRDM11 ;
ROSE Closest PRDM11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PRDM11 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001011 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers