SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000994
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:317457-322756
Size: 5299
Super-enhancer rank 994
Number of SE elements: 1
ChIP density(Case|Control): 11816.77|783.1922
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IFITM3 ;
ROSE Overlap IFITM3 ;
ROSE Proximal ATHL1 ; B4GALNT4 ; IFITM5 ; IFITM1 ; NLRP6 ; IFITM2 ;
ROSE Closest IFITM3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PSMD13 ; IFITM1 ; SIGIRR ; PKP3 ; SIRT3 ; NLRP6 ; ATHL1 ; B4GALNT4 ; IFITM5 ; IFITM3 ; IFITM2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000994 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers