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Super-enhancer overview

SE ID: SE_02_156000985
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:26768331-26800692
Size: 32361
Super-enhancer rank 985
Number of SE elements: 7
ChIP density(Case|Control): 14879.5878|3805.6536
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIGV ;
ROSE Overlap ARID1A ; PIGV ;
ROSE Proximal ZDHHC18 ;
ROSE Closest PIGV ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SFN ; ZDHHC18 ; ARID1A ; PIGV ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000985 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers