SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000965
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr7:71179522-71240567
Size: 61045
Super-enhancer rank 965
Number of SE elements: 16
ChIP density(Case|Control): 17635.9005|6428.0385
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WBSCR17 ;
ROSE Overlap WBSCR17 ;
ROSE Proximal ;
ROSE Closest WBSCR17 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR3914-1 ; WBSCR17 ; MIR3914-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000965 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers