SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000896
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr10:100996496-101013434
Size: 16938
Super-enhancer rank 896
Number of SE elements: 6
ChIP density(Case|Control): 12877.9614|1236.474
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LZTS2 ;
ROSE Overlap LZTS2 ; PDZD7 ;
ROSE Proximal SEMA4G ; SFXN3 ; MIR608 ; KAZALD1 ; C10orf2 ; MRPL43 ;
ROSE Closest LZTS2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C10orf2 ; SEMA4G ; FAM178A ; LZTS2 ; MRPL43 ; MIR608 ; SFXN3 ; KAZALD1 ; PDZD7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000896 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers