SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000878
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr21:32409710-32418887
Size: 9177
Super-enhancer rank 878
Number of SE elements: 2
ChIP density(Case|Control): 12915.7098|1150.7958
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EVA1C ;
ROSE Overlap EVA1C ;
ROSE Proximal URB1-AS1 ; EVA1C ; SNORA80A ; URB1 ;
ROSE Closest EVA1C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA URB1-AS1 ; SNORA80A ; EVA1C ; URB1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000878 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers